PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF06110 (DUF953)

PF06110.11 hits 8 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

Q9VMQ9 pyrimidodiazepine synthase (EC 1.5.4.1) from Drosophila melanogaster (see paper)
NP_001260098 clot, isoform B from Drosophila melanogaster
Aligns to 6:124 / 126 (94.4%), covers 100.0% of PF06110, 184.0 bits

NP_080835 thioredoxin domain-containing protein 17 from Mus musculus
Aligns to 8:122 / 123 (93.5%), covers 99.2% of PF06110, 172.4 bits

TXD17_HUMAN / Q9BRA2 Thioredoxin domain-containing protein 17; 14 kDa thioredoxin-related protein; TRP14; Protein 42-9-9; Thioredoxin-like protein 5 from Homo sapiens (Human) (see 2 papers)
NP_116120 thioredoxin domain-containing protein 17 from Homo sapiens
Aligns to 8:122 / 123 (93.5%), covers 99.2% of PF06110, 155.5 bits

TXD17_EPICO / T1SH39 Thioredoxin domain-containing protein 17; 14 kDa thioredoxin-related protein; TRP14 from Epinephelus coioides (Orange-spotted grouper) (Epinephelus nebulosus) (see paper)
Aligns to 8:122 / 123 (93.5%), covers 100.0% of PF06110, 139.6 bits

YOSC_SCHPO / Q9P7L1 Thioredoxin domain-containing protein C21C3.12c from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
Aligns to 3:116 / 124 (91.9%), covers 78.2% of PF06110, 53.8 bits

NP_208249 thioredoxin from Helicobacter pylori 26695
HP1458 thioredoxin (NCBI ptt file) from Helicobacter pylori 26695
Aligns to 3:100 / 104 (94.2%), covers 61.3% of PF06110, 30.3 bits

jhp1351 putative THIOREDOXIN (NCBI ptt file) from Helicobacter pylori J99
Aligns to 8:100 / 104 (89.4%), covers 61.3% of PF06110, 30.1 bits

HCD_00885 thioredoxin from Helicobacter cetorum MIT 99-5656
Aligns to 15:96 / 104 (78.8%), covers 58.0% of PF06110, 28.0 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory