PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF06237 (DUF1011)

PF06237.12 hits 16 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

XP_002925444 solute carrier family 52, riboflavin transporter, member 3 from Ailuropoda melanoleuca
Aligns to 297:395 / 469 (21.1%), covers 98.0% of PF06237, 136.0 bits

S52A3_MOUSE / Q9D6X5 Solute carrier family 52, riboflavin transporter, member 3; Riboflavin transporter 2; RFT2 from Mus musculus (Mouse) (see paper)
NP_081448 solute carrier family 52, riboflavin transporter, member 3 isoform 1 precursor from Mus musculus
Aligns to 288:386 / 460 (21.5%), covers 97.0% of PF06237, 134.4 bits

XP_008760550 solute carrier family 52, riboflavin transporter, member 3 isoform X1 from Rattus norvegicus
Aligns to 291:389 / 463 (21.4%), covers 97.0% of PF06237, 134.2 bits

S52A3_RAT / Q4FZU9 Solute carrier family 52, riboflavin transporter, member 3; Riboflavin transporter 2; rRFT2 from Rattus norvegicus (Rat) (see paper)
Aligns to 291:389 / 463 (21.4%), covers 97.0% of PF06237, 134.2 bits

S52A3_HUMAN / Q9NQ40 Solute carrier family 52, riboflavin transporter, member 3; Riboflavin transporter 2; hRFT2 from Homo sapiens (Human) (see 11 papers)
XP_005260712 solute carrier family 52, riboflavin transporter, member 3 isoform X1 from Homo sapiens
Aligns to 297:395 / 469 (21.1%), covers 97.0% of PF06237, 125.7 bits

S52A2_PAPHA / Q863Y8 Solute carrier family 52, riboflavin transporter, member 2; Porcine endogenous retrovirus A receptor 2; PERV-A receptor 2; Protein GPR172B; Riboflavin transporter 1; RFT1 from Papio hamadryas (Hamadryas baboon) (see paper)
Aligns to 276:374 / 448 (22.1%), covers 97.0% of PF06237, 122.7 bits

XP_016869311 solute carrier family 52, riboflavin transporter, member 2 isoform X3 from Homo sapiens
Aligns to 109:207 / 281 (35.2%), covers 98.0% of PF06237, 122.3 bits

S52A1_HUMAN / Q9NWF4 Solute carrier family 52, riboflavin transporter, member 1; Porcine endogenous retrovirus A receptor 2; PERV-A receptor 2; Protein GPR172B; Riboflavin transporter 1; hRFT1 from Homo sapiens (Human) (see 4 papers)
XP_011522253 solute carrier family 52, riboflavin transporter, member 1 isoform X1 from Homo sapiens
Aligns to 276:374 / 448 (22.1%), covers 97.0% of PF06237, 122.0 bits

S52A2_HUMAN / Q9HAB3 Solute carrier family 52, riboflavin transporter, member 2; Porcine endogenous retrovirus A receptor 1; PERV-A receptor 1; Protein GPR172A; Riboflavin transporter 3; hRFT3 from Homo sapiens (Human) (see 8 papers)
Aligns to 273:371 / 445 (22.2%), covers 98.0% of PF06237, 121.1 bits

S52A2_RAT / B5MEV3 Solute carrier family 52, riboflavin transporter, member 2; Porcine endogenous retrovirus A receptor 2; Protein GPR172B; Riboflavin transporter 1; rRFT1 from Rattus norvegicus (Rat) (see 2 papers)
XP_006241888 solute carrier family 52, riboflavin transporter, member 2 isoform X1 from Rattus norvegicus
Aligns to 278:376 / 450 (22.0%), covers 98.0% of PF06237, 121.0 bits

XP_006521214 solute carrier family 52, riboflavin transporter, member 2 isoform X1 from Mus musculus
Aligns to 278:376 / 450 (22.0%), covers 98.0% of PF06237, 120.8 bits

CG11576, NP_651901 uncharacterized protein from Drosophila melanogaster
Aligns to 320:418 / 487 (20.3%), covers 99.0% of PF06237, 118.3 bits

S52A2_PIG / Q863Y7 Solute carrier family 52, riboflavin transporter, member 2; Endogenous retrovirus A receptor; Protein GPR172B; Riboflavin transporter 1 from Sus scrofa (Pig) (see paper)
Aligns to 274:372 / 446 (22.2%), covers 97.0% of PF06237, 117.7 bits

S52AA_CAEEL / Q3LFN0 Riboflavin transporter rft-1; Solute carrier family 52, riboflavin transporter rft-1 from Caenorhabditis elegans (see paper)
NP_001033515 Riboflavin transporter rft-1 from Caenorhabditis elegans
Aligns to 258:356 / 427 (23.2%), covers 98.0% of PF06237, 95.8 bits

NP_001256040 Riboflavin transporter rft-2 from Caenorhabditis elegans
Aligns to 292:389 / 463 (21.2%), covers 97.0% of PF06237, 95.8 bits

S52AB_CAEEL / G4SDH4 Riboflavin transporter rft-2; Solute carrier family 52, riboflavin transporter rft-2 from Caenorhabditis elegans (see 2 papers)
Aligns to 305:402 / 476 (20.6%), covers 97.0% of PF06237, 95.7 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory