PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF06565 (DUF1126)

PF06565.12 hits 13 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

XP_018117414 EF-hand domain (C-terminal) containing 1 L homeolog isoform X1 from Xenopus laevis
3 alignments in 86:513 / 551 (59.7%), covering up to 100.0% of PF06565, 346.9 bits

EFHC1_HUMAN / Q5JVL4 EF-hand domain-containing protein 1; Myoclonin-1 from Homo sapiens (Human) (see 8 papers)
NP_060570 EF-hand domain-containing protein 1 isoform 1 from Homo sapiens
3 alignments in 86:512 / 640 (51.4%), covering up to 100.0% of PF06565, 336.4 bits

NP_001116419 EF-hand domain-containing protein 1 from Rattus norvegicus
3 alignments in 86:512 / 648 (50.8%), covering up to 100.0% of PF06565, 336.2 bits

EFHC1_MOUSE / Q9D9T8 EF-hand domain-containing protein 1; Myoclonin-1 from Mus musculus (Mouse) (see 2 papers)
3 alignments in 86:512 / 648 (50.8%), covering up to 100.0% of PF06565, 334.4 bits

FLJ22843 hypothetical protein FLJ22843 from Homo sapiens
4 alignments in 68:530 / 749 (49.1%), covering up to 100.0% of PF06565, 320.0 bits

XP_006495639 EF-hand domain-containing protein 1 isoform X1 from Mus musculus
3 alignments in 86:503 / 537 (59.6%), covering up to 100.0% of PF06565, 315.8 bits

PITG_07886 EF-hand domain-containing protein, putative from Phytophthora infestans T30-4
3 alignments in 69:529 / 621 (54.9%), covering up to 99.0% of PF06565, 292.4 bits

PITG_04513 RIB72 protein from Phytophthora infestans T30-4
3 alignments in 81:525 / 531 (60.3%), covering up to 100.0% of PF06565, 270.5 bits

GL50803_41512 Flagella associated protein from Giardia lamblia ATCC 50803
3 alignments in 150:623 / 647 (52.9%), covering up to 99.0% of PF06565, 265.1 bits

XP_006724625 EF-hand domain-containing family member C2 isoform X2 from Homo sapiens
3 alignments in 23:334 / 553 (47.2%), covering up to 100.0% of PF06565, 221.4 bits

XP_001568488 putative nucleoside diphosphate kinase from Leishmania braziliensis MHOM/BR/75/M2904
Aligns to 5:82 / 337 (23.1%), covers 71.4% of PF06565, 26.0 bits

NDK7_RAT / Q9QXL7 Nucleoside diphosphate kinase 7; NDK 7; NDP kinase 7; EC 2.7.4.6; nm23-R7 from Rattus norvegicus (Rat) (see paper)
Aligns to 16:102 / 395 (22.0%), covers 90.5% of PF06565, 25.5 bits

PITG_03634 nucleoside diphosphate kinase, putative from Phytophthora infestans T30-4
Aligns to 1:82 / 339 (24.2%), covers 87.6% of PF06565, 24.2 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory