PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF06568 (DUF1127)

PF06568.11 hits 13 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

BAB1_0914 hypothetical protein (NCBI) from Brucella melitensis biovar Abortus 2308
Aligns to 3:39 / 48 (77.1%), covers 97.3% of PF06568, 62.8 bits

RSP_0557 hypothetical protein (NCBI) from Rhodobacter sphaeroides 2.4.1
Aligns to 27:63 / 70 (52.9%), covers 97.3% of PF06568, 56.2 bits

BAB2_0574 conserved hypothetical protein (NCBI) from Brucella melitensis biovar Abortus 2308
Aligns to 3:39 / 45 (82.2%), covers 100.0% of PF06568, 53.3 bits

BAB2_0512 conserved hypothetical protein (NCBI) from Brucella melitensis biovar Abortus 2308
Aligns to 7:43 / 52 (71.2%), covers 97.3% of PF06568, 53.2 bits

YjiS / b4341 DUF1127 domain-containing protein YjiS from Escherichia coli K-12 substr. MG1655 (see paper)
Aligns to 18:54 / 54 (68.5%), covers 100.0% of PF06568, 52.8 bits

SMc02900 CONSERVED HYPOTHETICAL PROTEIN (NCBI ptt file) from Sinorhizobium meliloti 1021
Aligns to 3:39 / 45 (82.2%), covers 100.0% of PF06568, 51.4 bits

RSP_6037 hypothetical protein (NCBI) from Rhodobacter sphaeroides 2.4.1
Aligns to 25:61 / 71 (52.1%), covers 89.2% of PF06568, 48.4 bits

AEX15_20730 DUF1127 domain-containing protein from Salmonella enterica subsp. enterica serovar Kentucky
Aligns to 18:54 / 54 (68.5%), covers 100.0% of PF06568, 46.0 bits

PA5460 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 25:61 / 70 (52.9%), covers 97.3% of PF06568, 44.6 bits

PA5446 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 22:58 / 67 (55.2%), covers 97.3% of PF06568, 38.2 bits

SMc00821 HYPOTHETICAL PROTEIN (NCBI ptt file) from Sinorhizobium meliloti 1021
Aligns to 29:65 / 98 (37.8%), covers 94.6% of PF06568, 36.0 bits

PP0153 conserved hypothetical protein (NCBI ptt file) from Pseudomonas putida KT2440
Aligns to 26:62 / 71 (52.1%), covers 94.6% of PF06568, 34.5 bits

PA2031 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 26:66 / 84 (48.8%), covers 97.3% of PF06568, 30.2 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory