PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF06840 (DUF1241)

PF06840.11 hits 10 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

PDC10_HUMAN / Q9BUL8 Programmed cell death protein 10; Cerebral cavernous malformations 3 protein; TF-1 cell apoptosis-related protein 15 from Homo sapiens (Human) (see 5 papers)
Aligns to 14:161 / 212 (69.8%), covers 99.3% of PF06840, 212.5 bits

PDC10_MOUSE / Q8VE70 Programmed cell death protein 10; TF-1 cell apoptosis-related protein 15 from Mus musculus (Mouse) (see paper)
XP_011984225 programmed cell death protein 10 isoform X1 from Ovis aries
NP_062719 programmed cell death protein 10 from Mus musculus
Aligns to 14:161 / 212 (69.8%), covers 99.3% of PF06840, 212.5 bits

NP_001006554 programmed cell death protein 10 from Gallus gallus
Aligns to 14:161 / 212 (69.8%), covers 99.3% of PF06840, 212.4 bits

PDC10_RAT / Q6NX65 Programmed cell death protein 10 from Rattus norvegicus (Rat) (see paper)
XP_006232563 programmed cell death protein 10 isoform X1 from Rattus norvegicus
Aligns to 12:159 / 210 (70.5%), covers 98.7% of PF06840, 212.3 bits

PD10A_DANRE / Q6PHH3 Programmed cell death protein 10-A from Danio rerio (Zebrafish) (Brachydanio rerio) (see paper)
NP_956849 programmed cell death protein 10-A from Danio rerio
Aligns to 12:159 / 210 (70.5%), covers 98.7% of PF06840, 211.3 bits

PD10B_DANRE / Q6NWL1 Programmed cell death protein 10-B from Danio rerio (Zebrafish) (Brachydanio rerio) (see paper)
NP_998098 programmed cell death protein 10-B from Danio rerio
Aligns to 12:159 / 210 (70.5%), covers 98.7% of PF06840, 209.6 bits

NP_650459 cerebral cavernous malformation 3 from Drosophila melanogaster
Aligns to 5:156 / 208 (73.1%), covers 97.3% of PF06840, 207.5 bits

PDC10_CAEEL / Q17958 Programmed cell death protein 10 homolog; Cerebral cavernous malformation protein 3 from Caenorhabditis elegans (see paper)
NP_496290 Programmed cell death protein 10 homolog from Caenorhabditis elegans
Aligns to 5:161 / 215 (73.0%), covers 98.0% of PF06840, 174.5 bits

XP_016861134 programmed cell death protein 10 isoform X2 from Homo sapiens
Aligns to 1:98 / 149 (65.8%), covers 66.7% of PF06840, 144.0 bits

SVKA_DICDI / O61122 Serine/threonine-protein kinase svkA; EC 2.7.11.1; Severin kinase A from Dictyostelium discoideum (Slime mold) (see 2 papers)
DDB_G0286359 STE20 family protein kinase from Dictyostelium discoideum AX4
Aligns to 416:478 / 478 (13.2%), covers 33.3% of PF06840, 30.0 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory