PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF06840 (PDC10_C)

April 2024: See Interactive Tools for Functional Annotation of Bacterial Genomes for advice on using these tools.

PF06840 hits 19 sequences in PaperBLAST's database above the trusted cutoff. Showing hits to curated sequences only. Or see all hits or try another family.

PDC10_MOUSE / Q8VE70 Programmed cell death protein 10; TF-1 cell apoptosis-related protein 15 from Mus musculus (Mouse) (see paper)
Aligns to 74:161 / 212 (41.5%), covers 100.0% of PF06840, 136.0 bits

PDC10_HUMAN / Q9BUL8 Programmed cell death protein 10; Cerebral cavernous malformations 3 protein; TF-1 cell apoptosis-related protein 15 from Homo sapiens (Human) (see 5 papers)
Aligns to 74:161 / 212 (41.5%), covers 100.0% of PF06840, 136.0 bits

PDC10_RAT / Q6NX65 Programmed cell death protein 10 from Rattus norvegicus (Rat) (see paper)
Aligns to 72:159 / 210 (41.9%), covers 100.0% of PF06840, 136.0 bits

PD10A_DANRE / Q6PHH3 Programmed cell death protein 10-A from Danio rerio (Zebrafish) (Brachydanio rerio) (see paper)
Aligns to 72:159 / 210 (41.9%), covers 100.0% of PF06840, 135.1 bits

PD10B_DANRE / Q6NWL1 Programmed cell death protein 10-B from Danio rerio (Zebrafish) (Brachydanio rerio) (see paper)
Aligns to 72:159 / 210 (41.9%), covers 100.0% of PF06840, 134.8 bits

PDC10_CAEEL / Q17958 Programmed cell death protein 10 homolog; Cerebral cavernous malformation protein 3 from Caenorhabditis elegans (see paper)
Aligns to 71:179 / 215 (50.7%), covers 98.9% of PF06840, 106.6 bits

Or search for genetic data about PF06840 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory