PaperBLAST, GapMind, SitesBLAST, and Sites on a Tree will be down for server maintenance on Friday March 29.
Running HMMer for PF06945
PF06945 hits 12 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.
CC1308 hypothetical protein from Caulobacter crescentus CB15
Aligns to 13:60 / 74 (64.9%), covers 97.9% of PF06945, 73.6 bits
PP1455 conserved hypothetical protein from Pseudomonas putida KT2440
Aligns to 19:65 / 74 (63.5%), covers 97.9% of PF06945, 71.7 bits
YdhL / b1648 DUF1289 domain-containing protein YdhL from Escherichia coli K-12 substr. MG1655 (see paper)
P64474 Uncharacterized protein YdhL from Escherichia coli (strain K12)
b1648 orf, hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 12:58 / 79 (59.5%), covers 97.9% of PF06945, 68.2 bits
PA3752 hypothetical protein from Pseudomonas aeruginosa PAO1
Aligns to 8:54 / 64 (73.4%), covers 97.9% of PF06945, 67.6 bits
XCV1627 putative NUDIX hydrolase family protein from Xanthomonas campestris pv. vesicatoria str. 85-10
Aligns to 15:61 / 267 (17.6%), covers 89.6% of PF06945, 66.7 bits
YPO2376 conserved hypothetical protein from Yersinia pestis CO92
Aligns to 54:100 / 121 (38.8%), covers 97.9% of PF06945, 66.2 bits
STM1438 putative oxidoreductase from Salmonella typhimurium LT2
Aligns to 12:58 / 79 (59.5%), covers 97.9% of PF06945, 64.4 bits
PMI1391 hypothetical protein from Proteus mirabilis HI4320
Aligns to 12:58 / 79 (59.5%), covers 97.9% of PF06945, 64.0 bits
VCA0426 conserved hypothetical protein from Vibrio cholerae O1 biovar eltor str. N16961
Aligns to 24:70 / 77 (61.0%), covers 97.9% of PF06945, 62.3 bits
DDB_G0282477 hypothetical protein from Dictyostelium discoideum AX4
Aligns to 30:78 / 88 (55.7%), covers 97.9% of PF06945, 61.8 bits
PP5224 conserved hypothetical protein from Pseudomonas putida KT2440
Aligns to 22:68 / 74 (63.5%), covers 93.8% of PF06945, 59.2 bits
PA1788 hypothetical protein from Pseudomonas aeruginosa PAO1
Aligns to 8:55 / 155 (31.0%), covers 95.8% of PF06945, 59.0 bits
Or search for genetic data about PF06945 in the Fitness Browser
Lawrence Berkeley National Laboratory