PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF06998 (DUF1307)

PF06998.11 hits 8 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

lmo0207 hypothetical lipoprotein (NCBI ptt file) from Listeria monocytogenes EGD-e
Aligns to 28:149 / 153 (79.7%), covers 100.0% of PF06998, 150.1 bits

YehR / b2123 DUF1307 domain-containing lipoprotein YehR from Escherichia coli K-12 substr. MG1655 (see 2 papers)
b2123 orf, hypothetical protein (VIMSS) from Escherichia coli str. K-12 substr. MG1655
Aligns to 28:150 / 153 (80.4%), covers 100.0% of PF06998, 142.6 bits

STY2386 putative lipoprotein (NCBI ptt file) from Salmonella enterica subsp. enterica serovar Typhi str. CT18
t0699 putative lipoprotein (NCBI ptt file) from Salmonella enterica subsp. enterica serovar Typhi Ty2
Aligns to 52:173 / 176 (69.3%), covers 100.0% of PF06998, 133.4 bits

SA2247 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus N315
Aligns to 25:143 / 151 (78.8%), covers 100.0% of PF06998, 125.8 bits

SAUSA300_2403 putative lipoprotein (NCBI) from Staphylococcus aureus subsp. aureus USA300_FPR3757
Aligns to 25:143 / 151 (78.8%), covers 100.0% of PF06998, 125.8 bits

SGO_0004 putative lipoprotein (RefSeq) from Streptococcus gordonii str. Challis substr. CH1
Aligns to 30:160 / 172 (76.2%), covers 94.3% of PF06998, 116.3 bits

lmo0255 similar to unknown protein (NCBI ptt file) from Listeria monocytogenes EGD-e
Aligns to 37:163 / 167 (76.0%), covers 100.0% of PF06998, 110.3 bits

SSA_0004 Lipoprotein, putative (NCBI) from Streptococcus sanguinis SK36
Aligns to 29:152 / 163 (76.1%), covers 93.5% of PF06998, 91.2 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory