PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF07039 (DUF1325)

PF07039.11 hits 16 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

SGF29_HUMAN / Q96ES7 SAGA-associated factor 29; Coiled-coil domain-containing protein 101; SAGA complex-associated factor 29 from Homo sapiens (Human) (see 6 papers)
Aligns to 158:288 / 293 (44.7%), covers 99.2% of PF07039, 137.5 bits

SGF29_RAT / P0C606 SAGA-associated factor 29; rSGF29; Coiled-coil domain-containing protein 101; SAGA complex-associated factor 29 from Rattus norvegicus (Rat) (see paper)
XP_006230294 SAGA-associated factor 29 isoform X1 from Rattus norvegicus
Aligns to 158:288 / 293 (44.7%), covers 99.2% of PF07039, 137.4 bits

SGF29_YEAST / P25554 SAGA-associated factor 29; 29 kDa SAGA-associated factor; SAGA histone acetyltransferase complex 29 kDa subunit from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 6 papers)
NP_009917 Sgf29p from Saccharomyces cerevisiae S288C
YCL010C SaGa associated Factor 29kDa; Probable 29kKDa Subunit of SAGA histone acetyltransferase complex (RefSeq) from Saccharomyces cerevisiae
Aligns to 127:250 / 259 (47.9%), covers 98.5% of PF07039, 122.2 bits

XP_003547705 SAGA-associated factor 29 homolog B isoform X3 from Glycine max
Aligns to 130:264 / 269 (50.2%), covers 100.0% of PF07039, 121.0 bits

SGF29_SCHPO / Q9USW9 SAGA-associated factor 29 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see 4 papers)
NP_596000 SAGA complex subunit Sgf29 from Schizosaccharomyces pombe
SPBC1921.07c SAGA complex subunit Sgf29 (predicted) (RefSeq) from Schizosaccharomyces pombe
Aligns to 115:243 / 244 (52.9%), covers 98.5% of PF07039, 117.0 bits

XP_003633807 uncharacterized protein LOC100250716 isoform X1 from Vitis vinifera
Aligns to 142:276 / 281 (48.0%), covers 100.0% of PF07039, 115.0 bits

XP_001417743 predicted protein from Ostreococcus lucimarinus CCE9901
Aligns to 179:313 / 314 (43.0%), covers 99.2% of PF07039, 112.5 bits

SG29B_ARATH / Q500Z7 SAGA-associated factor 29 homolog B; AtSGF29b; 29 kDa SAGA-associated factor homolog B from Arabidopsis thaliana (Mouse-ear cress) (see paper)
AT5G40550 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 134:268 / 273 (49.5%), covers 100.0% of PF07039, 112.4 bits

SG29A_ARATH / Q8RXY6 SAGA-associated factor 29 homolog A; AtSGF29a; 29 kDa SAGA-associated factor homolog A from Arabidopsis thaliana (Mouse-ear cress) (see paper)
AT3G27460 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 131:265 / 270 (50.0%), covers 100.0% of PF07039, 112.3 bits

XP_002968194 SAGA-associated factor 29 homolog A isoform X2 from Selaginella moellendorffii
Aligns to 137:271 / 276 (48.9%), covers 99.2% of PF07039, 112.0 bits

XP_016878383 SAGA-associated factor 29 isoform X1 from Homo sapiens
Aligns to 158:258 / 258 (39.1%), covers 77.3% of PF07039, 111.5 bits

CNAG_06392 SAGA-associated factor 29 from Cryptococcus neoformans var. grubii H99
Aligns to 155:317 / 318 (51.3%), covers 99.2% of PF07039, 111.4 bits

XP_003576694 SAGA-associated factor 29 homolog A from Brachypodium distachyon
Aligns to 145:279 / 284 (47.5%), covers 100.0% of PF07039, 108.4 bits

PPTG_04971 hypothetical protein from Phytophthora parasitica INRA-310
Aligns to 170:304 / 309 (43.7%), covers 98.5% of PF07039, 100.8 bits

NP_001326215 SGF29 tudor-like domain-containing protein from Arabidopsis thaliana
Aligns to 131:245 / 251 (45.8%), covers 77.3% of PF07039, 86.5 bits

NP_001330202 SGF29 tudor-like domain-containing protein from Arabidopsis thaliana
Aligns to 134:252 / 301 (39.5%), covers 77.3% of PF07039, 85.8 bits

Or search for genetic data about PF07039 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory