PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF08551 (DUF1751)

PF08551.10 hits 11 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

TM115_YEAST / Q12239 Transmembrane protein 115 homolog from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
YOL107W Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and colocalizes in a punctate pattern with the early golgi/COPI vesicles; YOL107W is not an essential protein (RefSeq) from Saccharomyces cerevisiae
Aligns to 72:170 / 342 (28.9%), covers 100.0% of PF08551, 108.3 bits

AT3G07950 rhomboid protein-related (RefSeq) from Arabidopsis thaliana
Aligns to 44:142 / 304 (32.6%), covers 100.0% of PF08551, 106.8 bits

NP_062678 transmembrane protein 115 from Mus musculus
Aligns to 49:151 / 350 (29.4%), covers 100.0% of PF08551, 102.5 bits

TM115_HUMAN / Q12893 Transmembrane protein 115; Placental protein 6; Protein PL6 from Homo sapiens (Human) (see 3 papers)
NP_008955 transmembrane protein 115 from Homo sapiens
Aligns to 49:151 / 351 (29.3%), covers 100.0% of PF08551, 101.7 bits

TVAG_476950 Clan S-, family S54, Rhomboid-like serine peptidase from Trichomonas vaginalis G3
Aligns to 42:140 / 289 (34.3%), covers 89.9% of PF08551, 32.5 bits

Q1D006 Uncharacterized protein from Myxococcus xanthus (strain DK 1622)
Aligns to 52:152 / 242 (41.7%), covers 68.7% of PF08551, 31.9 bits

SPD_1920 peptidase, S54 (rhomboid) family protein (NCBI) from Streptococcus pneumoniae D39
Aligns to 49:143 / 225 (42.2%), covers 60.6% of PF08551, 28.8 bits

NCU03459 UBA domain-containing protein Ucp14 from Neurospora crassa OR74A
Aligns to 38:133 / 275 (34.9%), covers 62.6% of PF08551, 27.7 bits

Nmag_1128 Rhomboid family protein (RefSeq) from Natrialba magadii ATCC 43099
Aligns to 123:195 / 319 (22.9%), covers 62.6% of PF08551, 25.6 bits

D4GT94 rhomboid protease (EC 3.4.21.105) from Haloferax volcanii (see paper)
HVO_0727 rhomboid-like intramembrane serine protease, N-terminal Zn finger (RefSeq) from Haloferax volcanii DS2
Aligns to 117:214 / 296 (33.1%), covers 84.8% of PF08551, 25.2 bits

TVAG_037580 Clan S-, family S54, Rhomboid-like serine peptidase from Trichomonas vaginalis G3
Aligns to 40:136 / 250 (38.8%), covers 93.9% of PF08551, 25.2 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory