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Family Search for PF08719 (NADAR)

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Running HMMer for PF08719

PF08719 hits 21 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

FCOL_RS13285 NADAR family protein from Flavobacterium columnare ATCC 49512
Aligns to 16:175 / 177 (90.4%), covers 99.4% of PF08719, 197.6 bits

AWN65_RS00880 NADAR family protein from Flavobacterium covae
Aligns to 16:175 / 178 (89.9%), covers 99.4% of PF08719, 196.9 bits

PA4580 hypothetical protein from Pseudomonas aeruginosa PAO1
Aligns to 24:183 / 184 (87.0%), covers 99.4% of PF08719, 184.7 bits

DR_1263 NADAR family protein from Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539
Aligns to 9:157 / 159 (93.7%), covers 100.0% of PF08719, 176.5 bits

DR1263 conserved hypothetical protein from Deinococcus radiodurans R1
Aligns to 72:220 / 222 (67.1%), covers 100.0% of PF08719, 175.1 bits

RIBX_NOSP7 / B2J4E5 N-glycosidase Npun_R5314; Riboflavin biosynthesis intermediates N-glycosidase; EC 3.2.2.- from Nostoc punctiforme (strain ATCC 29133 / PCC 73102) (see paper)
Aligns to 4:146 / 156 (91.7%), covers 100.0% of PF08719, 148.5 bits

8bauA / W2PSB7 Phytophthora nicotianae var. Parasitica nadar in complex with adp- ribose (see paper)
Aligns to 13:186 / 189 (92.1%), covers 99.4% of PF08719, 140.4 bits

TTHERM_00486130 swarming motility protein ybiA from Tetrahymena thermophila SB210
Aligns to 59:200 / 204 (69.6%), covers 100.0% of PF08719, 135.8 bits

W8SSB7 N-glycosidase YbiA from Escherichia coli
Aligns to 7:146 / 149 (94.0%), covers 98.8% of PF08719, 132.6 bits

YbiA / b0798 N-glycosidase YbiA from Escherichia coli K-12 substr. MG1655 (see 3 papers)
ybiA / P30176 N-glycosidase YbiA from Escherichia coli (strain K12) (see 3 papers)
RIBX_ECOLI / P30176 N-glycosidase YbiA; Riboflavin biosynthesis intermediates N-glycosidase; EC 3.2.2.- from Escherichia coli (strain K12) (see 2 papers)
ybiA / ECOCYC|EG11579-MONOMER swarming motility protein ybiA from Escherichia coli K12 (see 6 papers)
b0798 hypothetical protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 18:157 / 160 (87.5%), covers 98.8% of PF08719, 132.2 bits

A1S_0598 hypothetical protein from Acinetobacter baumannii ATCC 17978
Aligns to 1:103 / 105 (98.1%), covers 60.1% of PF08719, 130.8 bits

VP_RS15305 GTP cyclohydrolase II from Vibrio parahaemolyticus RIMD 2210633
Aligns to 6:145 / 353 (39.7%), covers 100.0% of PF08719, 130.4 bits

RIBXA_VIBVY / Q7MGG3 Riboflavin biosynthesis protein VVA0006; EC 3.2.2.-; EC 3.5.4.25 from Vibrio vulnificus (strain YJ016) (see paper)
Aligns to 22:161 / 367 (38.1%), covers 100.0% of PF08719, 129.0 bits

FE46_RS11855 NADAR family protein from Flavobacterium psychrophilum
Aligns to 5:144 / 209 (67.0%), covers 98.8% of PF08719, 128.5 bits

RIBRX_MAIZE / K7WIZ6 Riboflavin biosynthesis protein PYRR, chloroplastic; EC 1.1.1.193; EC 3.2.2.- from Zea mays (Maize) (see 2 papers)
Aligns to 456:610 / 623 (24.9%), covers 98.8% of PF08719, 121.9 bits

PHS1 / F4JBI5 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) from Arabidopsis thaliana (see paper)
Aligns to 427:583 / 596 (26.3%), covers 98.8% of PF08719, 121.5 bits

NP_498348 NADAR domain-containing protein from Caenorhabditis elegans
Q9GYR5 NADAR domain-containing protein from Caenorhabditis elegans
Aligns to 226:405 / 937 (19.2%), covers 92.6% of PF08719, 92.6 bits

RIBRX_ARATH / Q9STY4 Riboflavin biosynthesis protein PYRR, chloroplastic; EC 1.1.1.193; EC 3.2.2.- from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
AT3G47390 cytidine/deoxycytidylate deaminase family protein from Arabidopsis thaliana
Aligns to 448:586 / 599 (23.2%), covers 67.5% of PF08719, 86.6 bits

YP_009345041 hypothetical protein from Xinzhou nematode virus 1
Aligns to 1074:1228 / 2708 (5.7%), covers 98.2% of PF08719, 84.8 bits

YP_009333461 hypothetical protein 1 from Beihai sipunculid worm virus 5
Aligns to 1412:1553 / 2368 (6.0%), covers 92.6% of PF08719, 70.9 bits

YP_009345038 RdRp from Xingshan nematode virus 2
Aligns to 1077:1232 / 2722 (5.7%), covers 93.9% of PF08719, 42.5 bits

Or search for genetic data about PF08719 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory