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Family Search for PF08878 (HamA)

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Running HMMer for PF08878

PF08878 hits 6 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

SSA_1888 hypothetical protein from Streptococcus sanguinis SK36
Aligns to 36:288 / 311 (81.4%), covers 99.6% of PF08878, 195.1 bits

F4NA83 Uncharacterized protein from Staphylococcus aureus
Aligns to 35:284 / 304 (82.2%), covers 99.6% of PF08878, 175.4 bits

UC7_RS13845 DUF1837 domain-containing protein from Enterococcus caccae ATCC BAA-1240
Aligns to 40:295 / 317 (80.8%), covers 100.0% of PF08878, 167.8 bits

AbpA / b2628 CP4-57 prophage; anti-bacteriophage protein from Escherichia coli K-12 substr. MG1655 (see 5 papers)
ABPA_ECOLI / P52127 Anti-bacteriophage protein A from Escherichia coli (strain K12) (see 2 papers)
NP_417117 anti-bacteriophage protein from Escherichia coli str. K-12 substr. MG1655
b2628 CP4-57 prophage; predicted protein from Escherichia coli str. K-12 substr. MG1655
Aligns to 294:520 / 538 (42.2%), covers 99.6% of PF08878, 142.3 bits

WP_055648496 Hachiman antiphage defense system protein HamA from Shewanella sp. Sh95
Aligns to 59:271 / 291 (73.2%), covers 74.8% of PF08878, 56.7 bits

HAMA_BACCE / P0DW39 Hachiman protein HamA from Bacillus cereus (see paper)
Aligns to 45:235 / 271 (70.5%), covers 73.0% of PF08878, 55.9 bits

Or search for genetic data about PF08878 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory