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Family Search for PF10239 (DUF2465)

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Running HMMer for PF10239

PF10239 hits 13 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

FA98A_HUMAN / Q8NCA5 Protein FAM98A from Homo sapiens (Human) (see paper)
Aligns to 28:327 / 518 (57.9%), covers 99.7% of PF10239, 432.5 bits

FA98A_MOUSE / Q3TJZ6 Protein FAM98A from Mus musculus (Mouse) (see paper)
Aligns to 28:327 / 515 (58.3%), covers 99.7% of PF10239, 431.9 bits

Q80VD1 Protein FAM98B from Mus musculus
Aligns to 34:330 / 429 (69.2%), covers 99.7% of PF10239, 430.6 bits

Q5FWT1 Protein FAM98A from Rattus norvegicus
Aligns to 28:327 / 515 (58.3%), covers 99.7% of PF10239, 430.5 bits

D4AE02 Family with sequence similarity 98, member B from Rattus norvegicus
Aligns to 34:330 / 434 (68.4%), covers 99.7% of PF10239, 430.3 bits

FAM98B / Q52LJ0 tRNA-splicing ligase complex FAM98B component (EC 6.5.1.8) from Homo sapiens (see 2 papers)
FA98B_HUMAN / Q52LJ0 Protein FAM98B from Homo sapiens (Human) (see 5 papers)
NP_775882 protein FAM98B from Homo sapiens
Aligns to 34:330 / 433 (68.6%), covers 99.7% of PF10239, 428.6 bits

CG5913 uncharacterized protein from Drosophila melanogaster
Aligns to 26:331 / 454 (67.4%), covers 99.3% of PF10239, 378.3 bits

XP_006500159 protein FAM98B isoform X1 from Mus musculus
2 alignments in 34:303 / 402 (67.2%), covering up to 49.0% of PF10239, 372.2 bits

E9PH82 Family with sequence similarity 98 member A from Homo sapiens
Aligns to 28:301 / 312 (87.8%), covers 90.1% of PF10239, 359.3 bits

F1RI46 Family with sequence similarity 98 member C from Sus scrofa
Aligns to 25:338 / 357 (88.0%), covers 98.7% of PF10239, 315.1 bits

Q6AXA1 Family with sequence similarity 98 member A L homeolog from Xenopus laevis
Aligns to 71:368 / 385 (77.4%), covers 99.3% of PF10239, 314.5 bits

Q17RN3 Protein FAM98C from Homo sapiens
Aligns to 26:334 / 349 (88.5%), covers 98.7% of PF10239, 301.3 bits

NP_001291467 protein FAM98A isoform 2 from Homo sapiens
Aligns to 1:132 / 323 (40.9%), covers 43.0% of PF10239, 229.2 bits

Or search for genetic data about PF10239 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory