PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF10615 (DUF2470)

PF10615.9 hits 25 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

Npun_F4928 hypothetical protein (RefSeq) from Nostoc punctiforme
Aligns to 10:85 / 94 (80.9%), covers 100.0% of PF10615, 87.1 bits

asl4369 hypothetical protein (NCBI ptt file) from Nostoc sp. PCC 7120
Aligns to 10:85 / 94 (80.9%), covers 100.0% of PF10615, 85.1 bits

PP1358 conserved hypothetical protein (NCBI ptt file) from Pseudomonas putida KT2440
Aligns to 205:275 / 289 (24.6%), covers 94.8% of PF10615, 58.3 bits

MSMEG_6519 pyridoxamine 5'-phosphate oxidase family protein (NCBI) from Mycobacterium smegmatis str. MC2 155
Aligns to 184:259 / 266 (28.6%), covers 98.7% of PF10615, 53.8 bits

AT3G03890 FMN binding (RefSeq) from Arabidopsis thaliana
Q8LDU1 AT3G03890 protein from Arabidopsis thaliana
Aligns to 240:314 / 321 (23.4%), covers 97.4% of PF10615, 51.7 bits

jhp0301 putative (NCBI ptt file) from Helicobacter pylori J99
Aligns to 2:74 / 251 (29.1%), covers 98.7% of PF10615, 49.0 bits

E1PY38 Putative heme iron utilization protein from Helicobacter pylori (strain SJM180)
Aligns to 2:74 / 251 (29.1%), covers 98.7% of PF10615, 48.8 bits

HUGZ_HELPY / O25087 Heme oxygenase HugZ; EC 1.14.99.- from Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) (see 3 papers)
HP0318 conserved hypothetical protein (NCBI ptt file) from Helicobacter pylori 26695
Aligns to 2:74 / 251 (29.1%), covers 98.7% of PF10615, 48.8 bits

HPSH_01645 hypothetical protein (RefSeq) from Helicobacter pylori Shi470
Aligns to 2:74 / 251 (29.1%), covers 98.7% of PF10615, 48.7 bits

HPF32_0987 HugZ family heme oxygenase from Helicobacter pylori F32
Aligns to 2:74 / 251 (29.1%), covers 98.7% of PF10615, 48.7 bits

NTHI1022 putative heme iron utilization protein (RefSeq) from Haemophilus influenzae 86-028NP
Aligns to 4:90 / 253 (34.4%), covers 81.8% of PF10615, 46.0 bits

HI0854 conserved hypothetical protein (NCBI ptt file) from Haemophilus influenzae Rd KW20
HI_0854 HugZ family heme oxygenase from Haemophilus influenzae Rd KW20
Aligns to 4:91 / 253 (34.8%), covers 80.5% of PF10615, 43.8 bits

Bdiaspc4_43115 HugZ family protein from Bradyrhizobium diazoefficiens
bll8143 bll8143 (NCBI ptt file) from Bradyrhizobium japonicum USDA 110
Aligns to 165:235 / 249 (28.5%), covers 96.1% of PF10615, 42.8 bits

RPA0359 conserved unknown protein (NCBI) from Rhodopseudomonas palustris CGA009
Aligns to 166:236 / 244 (29.1%), covers 98.7% of PF10615, 40.5 bits

STR1_STRTC / A0A384XG60 Strobilurin A biosynthesis cluster protein r1 from Strobilurus tenacellus (see 3 papers)
Aligns to 14:89 / 207 (36.7%), covers 85.7% of PF10615, 38.6 bits

HMU04180 Heme oxygenase (RefSeq) from Helicobacter mustelae 12198
Aligns to 4:75 / 272 (26.5%), covers 81.8% of PF10615, 37.3 bits

Q6UA21 Fiber protein Fb4 (Fragment) from Gossypium barbadense
Aligns to 77:154 / 185 (42.2%), covers 93.5% of PF10615, 36.7 bits

MSMEG_6419 hypothetical protein (NCBI) from Mycobacterium smegmatis str. MC2 155
Aligns to 172:244 / 261 (28.0%), covers 84.4% of PF10615, 32.1 bits

Cj1613c hypothetical protein Cj1613c (NCBI ptt file) from Campylobacter jejuni subsp. jejuni NCTC 11168
CJSA_1525 HugZ family heme oxygenase from Campylobacter jejuni subsp. jejuni IA3902
Aligns to 4:73 / 251 (27.9%), covers 80.5% of PF10615, 31.6 bits

CJJ81176_1600 hypothetical protein (NCBI) from Campylobacter jejuni subsp. jejuni 81-176
Aligns to 4:73 / 251 (27.9%), covers 80.5% of PF10615, 31.5 bits

CJM1_1550 HugZ family heme oxygenase from Campylobacter jejuni subsp. jejuni M1
Aligns to 4:73 / 251 (27.9%), covers 80.5% of PF10615, 31.5 bits

DRB0124 iron-chelator utilization protein, putative (NCBI ptt file) from Deinococcus radiodurans R1
Aligns to 17:93 / 307 (25.1%), covers 75.3% of PF10615, 27.6 bits

DR_B0124 SIP domain-containing protein from Deinococcus radiodurans R1
Aligns to 13:89 / 303 (25.4%), covers 75.3% of PF10615, 27.6 bits

GLUBP_ARATH / Q9LU39 Glutamyl-tRNA reductase-binding protein, chloroplastic; AtGluTRBP; GluTR-binding protein; Protein PROTON GRADIENT REGULATION 7 from Arabidopsis thaliana (Mouse-ear cress) (see 3 papers)
NP_566678 proton gradient regulation 7 from Arabidopsis thaliana
AT3G21200 hypothetical protein (RefSeq) from Arabidopsis thaliana
Aligns to 204:280 / 317 (24.3%), covers 92.2% of PF10615, 26.3 bits

A1S_2564 putative siderophore-interacting protein (RefSeq) from Acinetobacter baumannii ATCC 17978
Aligns to 1:65 / 145 (44.8%), covers 72.7% of PF10615, 25.4 bits

Or search for genetic data about PF10615 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory