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Family Search for PF11896 (DUF3416)

PF11896.8 hits 22 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

Rxyl_0314 alpha amylase, catalytic region (NCBI) from Rubrobacter xylanophilus DSM 9941
Aligns to 6:186 / 646 (28.0%), covers 98.9% of PF11896, 214.1 bits

SSGG_05058 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase from Streptomyces filamentosus NRRL 15998
Aligns to 3:190 / 672 (28.0%), covers 100.0% of PF11896, 209.3 bits

GLGE1_STRCO / Q9L1K2 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1; GMPMT 1; EC 2.4.99.16; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase 1 from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (see paper)
Q9L1K2 starch synthase (maltosyl-transferring) (EC 2.4.99.16) from Streptomyces coelicolor (see paper)
SCO5443 alpha-amylase (NCBI) from Streptomyces coelicolor A3(2)
Aligns to 19:206 / 675 (27.9%), covers 100.0% of PF11896, 204.6 bits

SVEN_5097 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase from Streptomyces venezuelae ATCC 10712
Aligns to 33:221 / 692 (27.3%), covers 100.0% of PF11896, 204.1 bits

GLGE2_STRCO / Q9KY04 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 2; GMPMT 2; EC 2.4.99.16; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase 2 from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (see paper)
SCO7335 alpha-amylase (NCBI) from Streptomyces coelicolor A3(2)
Aligns to 10:197 / 669 (28.1%), covers 100.0% of PF11896, 203.0 bits

MAP2433 hypothetical protein (NCBI) from Mycobacterium avium subsp. paratuberculosis str. k10
Aligns to 21:237 / 712 (30.5%), covers 100.0% of PF11896, 196.0 bits

MSMEG_4916 alpha-amylase family protein (NCBI) from Mycobacterium smegmatis str. MC2 155
Aligns to 3:217 / 692 (31.1%), covers 100.0% of PF11896, 195.1 bits

GLGE_MYCS2 / Q9RP48 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; GMPMT; EC 2.4.99.16; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase from Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) (see 3 papers)
Q9RP48 starch synthase (maltosyl-transferring) (EC 2.4.99.16) from Mycobacterium smegmatis (see paper)
Aligns to 8:222 / 697 (30.8%), covers 100.0% of PF11896, 195.1 bits

Hsero_2325 DUF3416 domain-containing protein from Herbaspirillum seropedicae SmR1
Aligns to 444:649 / 1132 (18.2%), covers 100.0% of PF11896, 193.7 bits

GLGE_MYCTU / P9WQ17 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; GMPMT; EC 2.4.99.16; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase; (1->4)-alpha-D-glucan:phosphate alpha-D-maltosyltransferase from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) (see 2 papers)
Rv1327c PROBABLE GLUCANASE GLGE (NCBI) from Mycobacterium tuberculosis H37Rv
NP_215843 alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase from Mycobacterium tuberculosis H37Rv
Aligns to 16:226 / 701 (30.1%), covers 100.0% of PF11896, 191.5 bits

H16_B1557 Glycosidase-like protein (NCBI) from Ralstonia eutropha H16
H16_B1557 DUF3416 domain-containing protein from Cupriavidus necator H16
Aligns to 447:650 / 1138 (17.9%), covers 99.4% of PF11896, 189.8 bits

PSPTO_2760 alpha-amylase family protein (NCBI ptt file) from Pseudomonas syringae pv. tomato str. DC3000
Aligns to 31:213 / 672 (27.2%), covers 99.4% of PF11896, 178.4 bits

CAP2UW1_2662 alpha amylase catalytic region (RefSeq) from Candidatus Accumulibacter phosphatis clade IIA str. UW-1
Aligns to 7:195 / 653 (28.9%), covers 99.4% of PF11896, 175.0 bits

BP1026B_I2056 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase from Burkholderia pseudomallei 1026b
Aligns to 478:664 / 1148 (16.3%), covers 100.0% of PF11896, 174.0 bits

BPSL2074 putative alpha-amylase-related protein (NCBI) from Burkholderia pseudomallei K96243
Aligns to 478:664 / 1148 (16.3%), covers 100.0% of PF11896, 173.8 bits

Psyr_2489 Alpha amylase, catalytic region (NCBI) from Pseudomonas syringae pv. syringae B728a
Aligns to 31:213 / 672 (27.2%), covers 99.4% of PF11896, 172.8 bits

XAC0154 alpha-amylase (NCBI) from Xanthomonas axonopodis pv. citri str. 306
Aligns to 387:571 / 1038 (17.8%), covers 99.4% of PF11896, 171.6 bits

cg1382 putative alpha-amylase (RefSeq) from Corynebacterium glutamicum ATCC 13032
Aligns to 3:194 / 675 (28.4%), covers 100.0% of PF11896, 165.2 bits

PA2151 hypothetical protein (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 20:203 / 664 (27.7%), covers 99.4% of PF11896, 158.9 bits

PA14_36740 putative alpha-amylase family protein (NCBI) from Pseudomonas aeruginosa UCBPP-PA14
Aligns to 20:203 / 664 (27.7%), covers 99.4% of PF11896, 157.9 bits

BBMN68_1127 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase from Bifidobacterium longum subsp. longum BBMN68
Aligns to 72:279 / 746 (27.9%), covers 100.0% of PF11896, 152.3 bits

Fisuc_1932 alpha amylase catalytic region (RefSeq) from Fibrobacter succinogenes subsp. succinogenes S85
Aligns to 9:101 / 576 (16.1%), covers 48.0% of PF11896, 91.4 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory