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Family Search for PF11938 (DUF3456)

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Running HMMer for PF11938

PF11938 hits 33 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

CNPY1_DANRE / Q2L6L1 Protein canopy-1; Protein D121 from Danio rerio (Zebrafish) (Brachydanio rerio) (see paper)
NP_001034586 protein canopy-1 precursor from Danio rerio
Aligns to 31:177 / 187 (78.6%), covers 100.0% of PF11938, 161.0 bits

Q1LZ72 Canopy 2 homolog (Zebrafish) from Bos taurus
Aligns to 27:171 / 182 (79.7%), covers 100.0% of PF11938, 160.1 bits

CNPY2_HUMAN / Q9Y2B0 Protein canopy homolog 2; MIR-interacting saposin-like protein; Putative secreted protein Zsig9; Transmembrane protein 4 from Homo sapiens (Human) (see paper)
NP_055070 protein canopy homolog 2 isoform 1 precursor from Homo sapiens
Aligns to 27:171 / 182 (79.7%), covers 100.0% of PF11938, 159.8 bits

XP_006513965 protein canopy homolog 2 isoform X2 from Mus musculus
Q9QXT0 Protein canopy homolog 2 from Mus musculus
Aligns to 27:171 / 182 (79.7%), covers 100.0% of PF11938, 159.5 bits

M3XQK4 Canopy FGF signaling regulator 2 from Mustela putorius furo
Aligns to 99:243 / 254 (57.1%), covers 100.0% of PF11938, 158.8 bits

A0JN30 Canopy FGF signaling regulator 2 from Rattus norvegicus
Aligns to 27:171 / 182 (79.7%), covers 100.0% of PF11938, 158.3 bits

F8W031 DUF3456 domain-containing protein (Fragment) from Homo sapiens
Aligns to 27:176 / 263 (57.0%), covers 98.7% of PF11938, 155.8 bits

B5XA82 Canopy homolog 2 from Salmo salar
Aligns to 33:175 / 186 (76.9%), covers 100.0% of PF11938, 155.0 bits

CNPY4_DANRE / Q2L6K8 Protein canopy 4 from Danio rerio (Zebrafish) (Brachydanio rerio) (see paper)
Aligns to 26:185 / 217 (73.7%), covers 100.0% of PF11938, 151.4 bits

CNPY4_MOUSE / Q8BQ47 Protein canopy homolog 4; Protein associated with Tlr4 from Mus musculus (Mouse) (see paper)
Aligns to 43:202 / 245 (65.3%), covers 98.0% of PF11938, 150.1 bits

CNPY3_MOUSE / Q9DAU1 Protein canopy homolog 3; Protein associated with Tlr4; Trinucleotide repeat-containing gene 5 protein from Mus musculus (Mouse) (see 6 papers)
Aligns to 48:206 / 276 (57.6%), covers 98.0% of PF11938, 148.8 bits

CNPY4_HUMAN / Q8N129 Protein canopy homolog 4 from Homo sapiens (Human) (see paper)
NP_689968 protein canopy homolog 4 precursor from Homo sapiens
Aligns to 37:196 / 248 (64.5%), covers 97.3% of PF11938, 148.6 bits

G3V828 Protein canopy homolog 3 from Rattus norvegicus
Aligns to 47:208 / 279 (58.1%), covers 98.0% of PF11938, 148.2 bits

A5GFQ5 Protein canopy homolog 3 from Sus scrofa
Aligns to 56:214 / 283 (56.2%), covers 98.0% of PF11938, 147.5 bits

CNPY3_HUMAN / Q9BT09 Protein canopy homolog 3; CTG repeat protein 4a; Expanded repeat-domain protein CAG/CTG 5; Protein associated with TLR4; Trinucleotide repeat-containing gene 5 protein from Homo sapiens (Human) (see paper)
Aligns to 48:206 / 278 (57.2%), covers 98.0% of PF11938, 147.3 bits

CNPY3_DANRE / A3KNS2 Protein canopy homolog 3; Trinucleotide repeat-containing gene 5 protein from Danio rerio (Zebrafish) (Brachydanio rerio) (see paper)
Aligns to 31:190 / 276 (58.0%), covers 97.3% of PF11938, 145.0 bits

F7CNK7 Protein canopy homolog 3 from Equus caballus
2 alignments in 56:232 / 301 (57.5%), covering up to 66.0% of PF11938, 130.1 bits

SEELE_DROME / Q7JXF7 Protein seele from Drosophila melanogaster (Fruit fly) (see paper)
NP_610547 seele from Drosophila melanogaster
Aligns to 26:172 / 189 (77.8%), covers 100.0% of PF11938, 130.1 bits

NP_001305771 protein canopy homolog 3 isoform 3 precursor from Homo sapiens
2 alignments in 48:239 / 311 (55.0%), covering up to 66.0% of PF11938, 126.8 bits

AT1G42480 hypothetical protein from Arabidopsis thaliana
Aligns to 24:163 / 182 (76.9%), covers 100.0% of PF11938, 120.8 bits

F8W1K5 Canopy FGF signaling regulator 2 (Fragment) from Homo sapiens
Aligns to 1:102 / 102 (100.0%), covers 69.3% of PF11938, 99.2 bits

NP_001292919 protein canopy homolog 3 isoform 3 from Mus musculus
Aligns to 1:81 / 151 (53.6%), covers 46.7% of PF11938, 70.5 bits

NP_001379479 Protein disulfide isomerase crld-1 from Caenorhabditis elegans
2 alignments in 26:135 / 310 (35.5%), covering up to 42.0% of PF11938, 51.2 bits

CREL1_CAEEL / Q19267 Protein disulfide isomerase crld-1; Cysteine-rich with EGF-like domain protein crld-1; EC 5.3.4.1 from Caenorhabditis elegans (see paper)
2 alignments in 26:135 / 356 (30.9%), covering up to 42.0% of PF11938, 50.3 bits

CREL1_MOUSE / Q91XD7 Protein disulfide isomerase Creld1; Cysteine-rich with EGF-like domain protein 1; EC 5.3.4.1 from Mus musculus (Mouse) (see paper)
NP_598691 protein disulfide isomerase Creld1 precursor from Mus musculus
Aligns to 45:103 / 420 (14.0%), covers 41.3% of PF11938, 49.1 bits

Q4V7F2 Protein disulfide isomerase Creld1 from Rattus norvegicus
Aligns to 45:103 / 420 (14.0%), covers 41.3% of PF11938, 48.7 bits

XP_011532410 protein disulfide isomerase CRELD1 isoform X2 from Homo sapiens
2 alignments in 45:142 / 426 (23.0%), covering up to 41.3% of PF11938, 46.0 bits

CREL1_HUMAN / Q96HD1 Protein disulfide isomerase CRELD1; Cysteine-rich with EGF-like domain protein 1; EC 5.3.4.1 from Homo sapiens (Human) (see 4 papers)
2 alignments in 45:142 / 420 (23.3%), covering up to 41.3% of PF11938, 46.0 bits

LOC105559782 cysteine-rich with EGF-like domain protein 2 from Vollenhovia emeryi
Aligns to 42:100 / 379 (15.6%), covers 41.3% of PF11938, 42.5 bits

XP_012817147 protein disulfide isomerase CRELD1 from Xenopus tropicalis
Aligns to 86:128 / 410 (10.5%), covers 26.0% of PF11938, 38.5 bits

MZB1_MOUSE / Q9D8I1 Marginal zone B- and B1-cell-specific protein; Plasma cell-induced resident endoplasmic reticulum protein; Plasma cell-induced resident ER protein; pERp1; Proapoptotic caspase adapter protein from Mus musculus (Mouse) (see 4 papers)
Aligns to 48:177 / 188 (69.1%), covers 99.3% of PF11938, 35.2 bits

NP_001019411 marginal zone B- and B1-cell-specific protein precursor from Rattus norvegicus
Aligns to 48:177 / 188 (69.1%), covers 100.0% of PF11938, 33.1 bits

MZB1_HUMAN / Q8WU39 Marginal zone B- and B1-cell-specific protein; Mesenteric estrogen-dependent adipose 7; MEDA-7; Plasma cell-induced resident endoplasmic reticulum protein; Plasma cell-induced resident ER protein; pERp1; Proapoptotic caspase adapter protein from Homo sapiens (Human) (see 4 papers)
NP_057543 marginal zone B- and B1-cell-specific protein precursor from Homo sapiens
Aligns to 49:178 / 189 (68.8%), covers 100.0% of PF11938, 28.4 bits

Or search for genetic data about PF11938 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory