PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF12051 (DUF3533)

PF12051.8 hits 25 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

SNG1_YEAST / P46950 Nitrosoguanidine resistance protein SNG1 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
NP_011713 Sng1p from Saccharomyces cerevisiae S288C
YGR197C Protein involved in nitrosoguanidine (MNNG) resistance; expression is regulated by transcription factors involved in multidrug resistance (RefSeq) from Saccharomyces cerevisiae
Aligns to 112:498 / 547 (70.7%), covers 99.7% of PF12051, 426.3 bits

YJY5_YEAST / P47090 Uncharacterized endoplasmic reticulum membrane protein YJR015W from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
YJR015W Putative protein of unknown function; localizes to the endoplasmic reticulum and cytoplasm; predicted to encode a membrane transporter based on phylogenetic analysis; YJR015W is a non-essential gene (RefSeq) from Saccharomyces cerevisiae
Aligns to 93:486 / 510 (77.3%), covers 99.2% of PF12051, 406.2 bits

SNG3 putative uncharacterized protein from Candida albicans (see paper)
Aligns to 181:571 / 609 (64.2%), covers 99.7% of PF12051, 349.2 bits

AFLA_077590 conserved hypothetical protein from Aspergillus flavus NRRL3357
Aligns to 27:389 / 475 (76.4%), covers 98.1% of PF12051, 308.5 bits

SCHCODRAFT_27314 hypothetical protein from Schizophyllum commune H4-8
Aligns to 12:379 / 391 (94.1%), covers 99.2% of PF12051, 308.3 bits

Rv0180c PROBABLE CONSERVED TRANSMEMBRANE PROTEIN (NCBI) from Mycobacterium tuberculosis H37Rv
NP_214694 transmembrane protein from Mycobacterium tuberculosis H37Rv
Aligns to 28:405 / 452 (83.6%), covers 98.4% of PF12051, 157.3 bits

MAB_4762 hypothetical protein (RefSeq) from Mycobacterium abscessus ATCC 19977
Aligns to 23:207 / 648 (28.5%), covers 46.0% of PF12051, 62.4 bits

P32399 Uncharacterized protein YhgE from Bacillus subtilis (strain 168)
BSU10160 putative methyl-accepting protein (RefSeq) from Bacillus subtilis subsp. subtilis str. 168
Aligns to 18:198 / 775 (23.4%), covers 45.5% of PF12051, 59.5 bits

SGO_0091 integral membrane protein (RefSeq) from Streptococcus gordonii str. Challis substr. CH1
Aligns to 15:220 / 807 (25.5%), covers 42.3% of PF12051, 46.1 bits

SPy2176 conserved hypothetical protein (NCBI ptt file) from Streptococcus pyogenes M1 GAS
Aligns to 16:218 / 757 (26.8%), covers 46.0% of PF12051, 43.1 bits

SSPP103 hypothetical protein (NCBI) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Aligns to 21:208 / 949 (19.8%), covers 35.4% of PF12051, 42.6 bits

LSA1261 Putative autotransport protein (NCBI) from Lactobacillus sakei subsp. sakei 23K
Aligns to 20:232 / 915 (23.3%), covers 43.1% of PF12051, 35.9 bits

lp_2901 integral membrane protein (NCBI ptt file) from Lactobacillus plantarum WCFS1
Aligns to 19:189 / 1106 (15.5%), covers 43.1% of PF12051, 35.0 bits

AH68_00635 YhgE/Pip domain-containing protein from Bifidobacterium kashiwanohense PV20-2
Aligns to 38:204 / 915 (18.3%), covers 40.2% of PF12051, 34.5 bits

lmo2360 transmembrane protein (NCBI ptt file) from Listeria monocytogenes EGD-e
Aligns to 15:184 / 927 (18.3%), covers 43.4% of PF12051, 34.0 bits

spr2039 Conserved hypothetical protein, truncation (NCBI ptt file) from Streptococcus pneumoniae R6
Aligns to 10:186 / 255 (69.4%), covers 48.9% of PF12051, 32.9 bits

SPCG_RS11630 YhgE/Pip domain-containing protein from Streptococcus pneumoniae CGSP14
Aligns to 10:187 / 255 (69.8%), covers 48.9% of PF12051, 32.8 bits

LMRG_00337 phage infection protein (RefSeq) from Listeria monocytogenes 10403S
lmo0650 conserved membrane protein (NCBI ptt file) from Listeria monocytogenes EGD-e
Aligns to 20:206 / 896 (20.9%), covers 42.3% of PF12051, 31.2 bits

SAUSA300_2578 putative phage infection protein (NCBI) from Staphylococcus aureus subsp. aureus USA300_FPR3757
SACOL2665 phage infection protein, putative (NCBI) from Staphylococcus aureus subsp. aureus COL
Aligns to 25:212 / 993 (18.9%), covers 37.6% of PF12051, 31.2 bits

NWMN_2542 hypothetical protein (RefSeq) from Staphylococcus aureus subsp. aureus str. Newman
Aligns to 27:214 / 995 (18.9%), covers 37.6% of PF12051, 31.1 bits

SERP2262 phage infection protein (NCBI) from Staphylococcus epidermidis RP62A
Aligns to 26:213 / 954 (19.7%), covers 37.3% of PF12051, 28.1 bits

pip phage infection protein from Lactococcus lactis subsp. lactis (see paper)
Aligns to 25:221 / 901 (21.9%), covers 46.0% of PF12051, 28.0 bits

LCAZH_0444 YhgE/Pip domain-containing protein from Lactobacillus paracasei
Aligns to 21:209 / 910 (20.8%), covers 41.0% of PF12051, 27.8 bits

SATW20_27810 YhgE/Pip domain-containing protein from Staphylococcus aureus subsp. aureus TW20
Aligns to 25:212 / 993 (18.9%), covers 37.6% of PF12051, 27.6 bits

SA2436 hypothetical protein (NCBI) from Staphylococcus aureus subsp. aureus N315
SAV2643 similar to phage infection protein (NCBI) from Staphylococcus aureus subsp. aureus Mu50
Aligns to 25:212 / 993 (18.9%), covers 37.6% of PF12051, 27.6 bits

Or search for genetic data about PF12051 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory