PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF12372 (DUF3652)

PF12372.8 hits 17 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

XP_006822985 huntingtin from Saccoglossus kowalevskii
Aligns to 1471:1511 / 2816 (1.5%), covers 100.0% of PF12372, 77.2 bits

XP_536221 huntingtin isoform X1 from Canis lupus familiaris
Aligns to 1503:1543 / 3130 (1.3%), covers 100.0% of PF12372, 76.5 bits

XP_420822 huntingtin isoform X1 from Gallus gallus
Aligns to 1467:1507 / 3095 (1.3%), covers 100.0% of PF12372, 76.4 bits

P51111 Huntingtin from Rattus norvegicus
Aligns to 1484:1524 / 3110 (1.3%), covers 100.0% of PF12372, 76.4 bits

NP_077333 huntingtin from Rattus norvegicus
Aligns to 1494:1534 / 3120 (1.3%), covers 100.0% of PF12372, 76.4 bits

HD_MOUSE / P42859 Huntingtin; Huntington disease protein homolog; HD protein homolog from Mus musculus (Mouse) (see 3 papers)
Aligns to 1493:1533 / 3119 (1.3%), covers 100.0% of PF12372, 76.3 bits

NP_034544 huntingtin from Mus musculus
Aligns to 1494:1534 / 3120 (1.3%), covers 100.0% of PF12372, 76.3 bits

XP_008248081 huntingtin from Oryctolagus cuniculus
Aligns to 1426:1466 / 3053 (1.3%), covers 100.0% of PF12372, 76.2 bits

NP_002102 huntingtin from Homo sapiens
Aligns to 1515:1555 / 3144 (1.3%), covers 100.0% of PF12372, 76.0 bits

HD_HUMAN / P42858 Huntingtin; Huntington disease protein; HD protein from Homo sapiens (Human) (see 18 papers)
Aligns to 1513:1553 / 3142 (1.3%), covers 100.0% of PF12372, 76.0 bits

XP_001364862 huntingtin isoform X3 from Monodelphis domestica
Aligns to 1506:1546 / 3135 (1.3%), covers 100.0% of PF12372, 74.1 bits

XP_005160073 huntingtin isoform X5 from Danio rerio
Aligns to 1487:1527 / 3115 (1.3%), covers 100.0% of PF12372, 72.3 bits

NP_571093 huntingtin from Danio rerio
Aligns to 1487:1527 / 3121 (1.3%), covers 100.0% of PF12372, 72.3 bits

HD_TAKRU / P51112 Huntingtin; Huntington disease protein homolog; HD protein homolog from Takifugu rubripes (Japanese pufferfish) (Fugu rubripes) (see paper)
Aligns to 1508:1548 / 3148 (1.3%), covers 100.0% of PF12372, 71.9 bits

NP_001119700 huntingtin from Ciona intestinalis
Aligns to 1322:1362 / 2946 (1.4%), covers 100.0% of PF12372, 70.1 bits

NP_001263041 huntingtin, isoform B from Drosophila melanogaster
Aligns to 2717:2759 / 3583 (1.2%), covers 97.6% of PF12372, 65.0 bits

XP_005093645 huntingtin from Aplysia californica
Aligns to 1375:1415 / 3024 (1.4%), covers 100.0% of PF12372, 57.4 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory