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Family Search for PF12478 (UBAP2-Lig)

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Running HMMer for PF12478

PF12478 hits 14 sequences in PaperBLAST's database above the trusted cutoff. Showing hits to curated sequences only. Or see all hits or try another family.

LIG_AEDAE / Q16VD3 Protein lingerer from Aedes aegypti (Yellowfever mosquito) (Culex aegypti) (see paper)
Aligns to 538:572 / 1250 (2.8%), covers 100.0% of PF12478, 71.3 bits

LIG_DROME / Q86S05 Protein lingerer from Drosophila melanogaster (Fruit fly) (see 3 papers)
Aligns to 575:610 / 1375 (2.6%), covers 100.0% of PF12478, 71.3 bits

UBAP2_HUMAN / Q5T6F2 Ubiquitin-associated protein 2; UBAP-2; RNA polymerase II degradation factor UBAP2 from Homo sapiens (Human) (see 2 papers)
Aligns to 512:544 / 1119 (2.9%), covers 100.0% of PF12478, 64.0 bits

UBP2L_MOUSE / Q80X50 Ubiquitin-associated protein 2-like; RNA polymerase II degradation factor Ubap2l from Mus musculus (Mouse) (see paper)
Aligns to 515:546 / 1107 (2.9%), covers 97.0% of PF12478, 58.8 bits

UBP2L_HUMAN / Q14157 Ubiquitin-associated protein 2-like; Protein NICE-4; RNA polymerase II degradation factor UBAP2L from Homo sapiens (Human) (see 5 papers)
Aligns to 495:526 / 1087 (2.9%), covers 97.0% of PF12478, 58.7 bits

Or search for genetic data about PF12478 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory