PaperBLAST – Find papers about a protein or its homologs

 

Family Search for PF15787 (DUF4704)

PF15787.5 hits 23 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

NP_001284878 rugose, isoform P from Drosophila melanogaster
Aligns to 680:955 / 3446 (8.0%), covers 99.6% of PF15787, 391.7 bits

NBEA_DROME / Q9W4E2 Neurobeachin; A-kinase anchor protein 550; AKAP 550; Protein rugose; dAKAP550 from Drosophila melanogaster (Fruit fly) (see 6 papers)
Aligns to 634:919 / 3466 (8.3%), covers 99.6% of PF15787, 376.4 bits

XP_008759249 LOW QUALITY PROTEIN: neurobeachin isoform X1 from Rattus norvegicus
Aligns to 388:659 / 2860 (9.5%), covers 100.0% of PF15787, 366.7 bits

XP_005266404 neurobeachin isoform X1 from Homo sapiens
Aligns to 472:743 / 2967 (9.2%), covers 100.0% of PF15787, 366.6 bits

Q5T321 Neurobeachin, isoform CRA_e from Homo sapiens
Aligns to 472:743 / 2943 (9.2%), covers 100.0% of PF15787, 366.6 bits

NBEA_HUMAN / Q8NFP9 Neurobeachin; Lysosomal-trafficking regulator 2; Protein BCL8B from Homo sapiens (Human) (see paper)
Aligns to 472:743 / 2946 (9.2%), covers 100.0% of PF15787, 366.6 bits

NBEA_MOUSE / Q9EPN1 Neurobeachin; Lysosomal-trafficking regulator 2 from Mus musculus (Mouse) (see paper)
Aligns to 462:733 / 2936 (9.3%), covers 100.0% of PF15787, 366.1 bits

XP_006501590 neurobeachin isoform X12 from Mus musculus
Aligns to 462:733 / 2928 (9.3%), covers 100.0% of PF15787, 366.1 bits

XP_017213453 neurobeachin isoform X9 from Danio rerio
Aligns to 468:739 / 2223 (12.2%), covers 100.0% of PF15787, 363.2 bits

LRBA_MOUSE / Q9ESE1 Lipopolysaccharide-responsive and beige-like anchor protein; Beige-like protein from Mus musculus (Mouse) (see paper)
Aligns to 446:717 / 2856 (9.5%), covers 100.0% of PF15787, 357.7 bits

XP_006502411 lipopolysaccharide-responsive and beige-like anchor protein isoform X1 from Mus musculus
Aligns to 446:717 / 2871 (9.5%), covers 100.0% of PF15787, 357.7 bits

XP_016864361 lipopolysaccharide-responsive and beige-like anchor protein isoform X3 from Homo sapiens
Aligns to 446:717 / 2857 (9.5%), covers 100.0% of PF15787, 355.9 bits

LRBA_HUMAN / P50851 Lipopolysaccharide-responsive and beige-like anchor protein; Beige-like protein; CDC4-like protein from Homo sapiens (Human) (see 2 papers)
Aligns to 446:717 / 2863 (9.5%), covers 100.0% of PF15787, 355.9 bits

NBEA_CAEEL / Q19317 Putative neurobeachin homolog; Suppressor enhancer of lin-12 from Caenorhabditis elegans (see paper)
NP_497939 Putative neurobeachin homolog from Caenorhabditis elegans
Aligns to 544:820 / 2507 (11.0%), covers 99.3% of PF15787, 316.9 bits

BCHB_ARATH / F4I9T0 BEACH domain-containing protein B; BEACH-domain homolog B from Arabidopsis thaliana (Mouse-ear cress) (see paper)
Aligns to 697:971 / 2604 (10.6%), covers 99.3% of PF15787, 259.6 bits

BCHC1_ARATH / F4JD14 BEACH domain-containing protein C1; BEACH-domain homolog C1 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
Aligns to 310:575 / 1941 (13.7%), covers 90.0% of PF15787, 133.6 bits

XP_011509960 neurobeachin-like protein 1 isoform X1 from Homo sapiens
Aligns to 882:1161 / 2736 (10.2%), covers 93.2% of PF15787, 116.2 bits

NBEL1_HUMAN / Q6ZS30 Neurobeachin-like protein 1; Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 16 protein; Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 17 protein from Homo sapiens (Human) (see paper)
Aligns to 853:1132 / 2694 (10.4%), covers 93.2% of PF15787, 116.2 bits

NBEL2_DANRE / E7FAW3 Neurobeachin-like protein 2 from Danio rerio (Zebrafish) (Brachydanio rerio) (see paper)
Aligns to 911:1185 / 2801 (9.8%), covers 93.5% of PF15787, 111.4 bits

NP_899099 neurobeachin-like protein 2 from Mus musculus
Aligns to 872:1146 / 2750 (10.0%), covers 92.1% of PF15787, 97.5 bits

NBEL2_HUMAN / Q6ZNJ1 Neurobeachin-like protein 2 from Homo sapiens (Human) (see 3 papers)
NP_055990 neurobeachin-like protein 2 from Homo sapiens
Aligns to 873:1150 / 2754 (10.1%), covers 91.4% of PF15787, 79.7 bits

BCL8_HUMAN / P0C6P0 Putative protein BCL8; Neurobeachin pseudogene 1 from Homo sapiens (Human) (see 2 papers)
Aligns to 4:95 / 100 (92.0%), covers 30.1% of PF15787, 70.8 bits

DDB_G0271502 BEACH domain-containing protein from Dictyostelium discoideum AX4
Aligns to 471:753 / 2806 (10.1%), covers 74.6% of PF15787, 69.1 bits

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory