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Family Search for TIGR00001

TIGR00001 hits 48 sequences in PaperBLAST's database above the trusted cutoff. Showing all hits. Or show only hits to curated sequences or try another family.

NGO0297 putative 50s ribosomal protein L35 (NCBI) from Neisseria gonorrhoeae FA 1090
NMB0722 50S ribosomal protein L35 (NCBI) from Neisseria meningitidis MC58
Aligns to 2:64 / 65 (96.9%), covers 100.0% of TIGR00001, 99.1 bits

sync_0059 ribosomal protein L35 (NCBI) from Synechococcus sp. CC9311
Aligns to 2:64 / 65 (96.9%), covers 100.0% of TIGR00001, 94.2 bits

SYNW0058 50S ribosomal protein L35 (VIMSS) from Synechococcus sp. WH 8102
Aligns to 2:64 / 65 (96.9%), covers 100.0% of TIGR00001, 93.9 bits

ssl1426 50S ribosomal protein L35 (NCBI ptt file) from Synechocystis sp. PCC 6803
Aligns to 2:66 / 67 (97.0%), covers 100.0% of TIGR00001, 93.3 bits

azo1081 50S ribosomal protein L35 (NCBI) from Azoarcus sp. BH72
Aligns to 2:64 / 65 (96.9%), covers 100.0% of TIGR00001, 92.8 bits

VP1281 large subunit ribosomal protein L35 (NCBI ptt file) from Vibrio parahaemolyticus RIMD 2210633
Aligns to 2:63 / 64 (96.9%), covers 100.0% of TIGR00001, 92.5 bits

SG1420 50S ribosomal protein L35 (NCBI) from Sodalis glossinidius str. 'morsitans'
Aligns to 2:64 / 65 (96.9%), covers 100.0% of TIGR00001, 92.3 bits

RpmI / b1717 50S ribosomal subunit protein L35 from Escherichia coli K-12 substr. MG1655 (see 4 papers)
RL35_ECOLI / P0A7Q1 50S ribosomal protein L35; Large ribosomal subunit protein bL35; Ribosomal protein A from Escherichia coli (strain K12) (see 9 papers)
P0A7Q1 50S ribosomal subunit protein L35 from Escherichia coli (strain K12) (see 2 papers)
rpmI 50S ribosomal protein L35 from Escherichia coli K12 (see paper)
STM1335 50S ribosomal subunit protein L35 (NCBI ptt file) from Salmonella typhimurium LT2
NP_416232 50S ribosomal subunit protein L35 from Escherichia coli str. K-12 substr. MG1655
b1717 50S ribosomal subunit protein A (VIMSS) from Escherichia coli str. K-12 substr. MG1655
Aligns to 2:64 / 65 (96.9%), covers 100.0% of TIGR00001, 90.9 bits

PG0990 ribosomal protein L35 (NCBI) from Porphyromonas gingivalis W83
Aligns to 2:64 / 65 (96.9%), covers 98.4% of TIGR00001, 90.7 bits

M892_02880 50S ribosomal protein L35 from Vibrio campbellii ATCC BAA-1116
Aligns to 2:63 / 64 (96.9%), covers 100.0% of TIGR00001, 90.5 bits

MRA_1653 50S ribosomal protein L35 (RefSeq) from Mycobacterium tuberculosis H37Ra
MT1680 50S ribosomal protein L35 (NCBI) from Mycobacterium tuberculosis CDC1551
Rv1642 50S ribosomal protein L35 (NCBI) from Mycobacterium tuberculosis H37Rv
Aligns to 2:64 / 64 (98.4%), covers 98.4% of TIGR00001, 89.9 bits

GBAA_4818 50S ribosomal protein L35 from Bacillus anthracis str. 'Ames Ancestor'
Aligns to 2:64 / 66 (95.5%), covers 98.4% of TIGR00001, 88.9 bits

RK35_SPIOL / P23326 50S ribosomal protein L35, chloroplastic; CL35; Chloroplastic large ribosomal subunit protein bL35c from Spinacia oleracea (Spinach) (see 2 papers)
Aligns to 90:152 / 159 (39.6%), covers 100.0% of TIGR00001, 88.1 bits

MSMEG_3792 ribosomal protein L35 (NCBI) from Mycobacterium smegmatis str. MC2 155
Aligns to 2:64 / 64 (98.4%), covers 98.4% of TIGR00001, 87.5 bits

SA1503 50S ribosomal protein L35 (NCBI) from Staphylococcus aureus subsp. aureus N315
SACOL1726 ribosomal protein L35 (NCBI) from Staphylococcus aureus subsp. aureus COL
Aligns to 2:64 / 66 (95.5%), covers 100.0% of TIGR00001, 87.4 bits

BTH_I2593 ribosomal protein L35 (NCBI) from Burkholderia thailandensis E264
BPSL1943 50S ribosomal protein L35 (NCBI) from Burkholderia pseudomallei K96243
bglu_1g21500 Ribosomal protein L35 (RefSeq) from Burkholderia glumae BGR1
Aligns to 2:64 / 65 (96.9%), covers 98.4% of TIGR00001, 86.9 bits

BB0189 ribosomal protein L35 (rpmI) (NCBI ptt file) from Borrelia burgdorferi B31
Aligns to 3:65 / 66 (95.5%), covers 98.4% of TIGR00001, 86.5 bits

SCAB_73971 50S ribosomal protein L35 (RefSeq) from Streptomyces scabiei 87.22
Aligns to 2:64 / 64 (98.4%), covers 98.4% of TIGR00001, 85.8 bits

CT834 L35 Ribosomal Protein (NCBI ptt file) from Chlamydia trachomatis D/UW-3/CX
Aligns to 2:64 / 64 (98.4%), covers 96.8% of TIGR00001, 83.8 bits

lmo1784 ribosomal protein L35 (NCBI ptt file) from Listeria monocytogenes EGD-e
Aligns to 2:64 / 66 (95.5%), covers 96.8% of TIGR00001, 83.6 bits

TP0849 ribosomal protein L35 (rpmI) (NCBI ptt file) from Treponema pallidum subsp. pallidum str. Nichols
Aligns to 2:65 / 66 (97.0%), covers 98.4% of TIGR00001, 81.8 bits

PA2742 50S ribosomal protein L35 (NCBI) from Pseudomonas aeruginosa PAO1
Aligns to 2:63 / 64 (96.9%), covers 96.8% of TIGR00001, 81.5 bits

HI1319m ribosomal protein L35 (NCBI ptt file) from Haemophilus influenzae Rd KW20
Aligns to 2:64 / 65 (96.9%), covers 100.0% of TIGR00001, 81.0 bits

HSM_1355 50S ribosomal protein L35 from Histophilus somni 2336
HSM_1355 50S ribosomal protein L35 (RefSeq) from Haemophilus somnus 2336
Aligns to 2:64 / 65 (96.9%), covers 100.0% of TIGR00001, 79.9 bits

RK35_ARATH / Q8VZ55 50S ribosomal protein L35, chloroplastic from Arabidopsis thaliana (Mouse-ear cress) (see paper)
AT2G24090 ribosomal protein L35 family protein (RefSeq) from Arabidopsis thaliana
Aligns to 75:137 / 145 (43.4%), covers 100.0% of TIGR00001, 79.5 bits

FN0326 LSU ribosomal protein L35P (NCBI ptt file) from Fusobacterium nucleatum subsp. nucleatum ATCC 25586
Aligns to 2:64 / 68 (92.6%), covers 100.0% of TIGR00001, 79.1 bits

RL35_THET8 / Q5SKU1 50S ribosomal protein L35 from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) (see paper)
Aligns to 2:64 / 65 (96.9%), covers 100.0% of TIGR00001, 78.8 bits

Alvin_0982 ribosomal protein L35 (RefSeq) from Allochromatium vinosum DSM 180
Aligns to 2:64 / 65 (96.9%), covers 100.0% of TIGR00001, 78.6 bits

CTL0206 LSU ribosomal protein L35P (RefSeq) from Chlamydia trachomatis 434/Bu
Aligns to 1:61 / 61 (100.0%), covers 93.7% of TIGR00001, 77.8 bits

MPN116 ribosomal protein L35 (NCBI ptt file) from Mycoplasma pneumoniae M129
Aligns to 1:59 / 59 (100.0%), covers 92.1% of TIGR00001, 76.9 bits

BAB1_2123 Ribosomal protein L35 (NCBI) from Brucella melitensis biovar Abortus 2308
Aligns to 2:64 / 66 (95.5%), covers 98.4% of TIGR00001, 76.7 bits

MHO_1280 50S ribosomal protein L35 (RefSeq) from Mycoplasma hominis
Aligns to 2:62 / 62 (98.4%), covers 95.2% of TIGR00001, 76.1 bits

NCgl1325 50S ribosomal protein L35 from Corynebacterium glutamicum ATCC 13032
Aligns to 1:63 / 64 (98.4%), covers 96.8% of TIGR00001, 76.0 bits

HP0125 ribosomal protein L35 (rpl35) (NCBI ptt file) from Helicobacter pylori 26695
Aligns to 2:63 / 64 (96.9%), covers 98.4% of TIGR00001, 75.9 bits

LGG_RS08395 50S ribosomal protein L35 from Lactobacillus rhamnosus GG
Aligns to 2:64 / 66 (95.5%), covers 98.4% of TIGR00001, 75.6 bits

spr0862 50S Ribosomal protein L35 (NCBI ptt file) from Streptococcus pneumoniae R6
Aligns to 2:64 / 66 (95.5%), covers 98.4% of TIGR00001, 75.4 bits

lpp2768 50S ribosomal protein L35 (NCBI) from Legionella pneumophila str. Paris
Aligns to 2:65 / 66 (97.0%), covers 96.8% of TIGR00001, 74.4 bits

RL35_RHOPA / Q6NDR5 50S ribosomal protein L35; RRP-L35 from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) (see paper)
Aligns to 2:65 / 66 (97.0%), covers 98.4% of TIGR00001, 72.9 bits

cpfrc_00945 50S ribosomal protein L35 from Corynebacterium pseudotuberculosis FRC41
Aligns to 1:63 / 64 (98.4%), covers 95.2% of TIGR00001, 72.3 bits

RL35_DEIRA / Q9RSW6 50S ribosomal protein L35 from Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) (see 6 papers)
Aligns to 2:64 / 66 (95.5%), covers 98.4% of TIGR00001, 72.1 bits

ruthe_01785 50S ribosomal protein L35 from Rubellimicrobium thermophilum DSM 16684
Aligns to 2:64 / 66 (95.5%), covers 100.0% of TIGR00001, 70.0 bits

CLIBASIA_01020 50S ribosomal protein L35 (RefSeq) from Candidatus Liberibacter asiaticus str. psy62
Aligns to 2:65 / 67 (95.5%), covers 98.4% of TIGR00001, 69.3 bits

SMc00363 PROBABLE 50S RIBOSOMAL PROTEIN L35 (NCBI ptt file) from Sinorhizobium meliloti 1021
Aligns to 2:65 / 67 (95.5%), covers 98.4% of TIGR00001, 66.8 bits

ECH_0198 ribosomal protein L35 (NCBI) from Ehrlichia chaffeensis str. Arkansas
Aligns to 2:64 / 66 (95.5%), covers 100.0% of TIGR00001, 66.5 bits

CC1046 ribosomal protein L35 (NCBI ptt file) from Caulobacter crescentus CB15
Aligns to 2:64 / 66 (95.5%), covers 100.0% of TIGR00001, 65.8 bits

GOX0264 LSU ribosomal protein L35P (NCBI) from Gluconobacter oxydans 621H
Aligns to 2:64 / 67 (94.0%), covers 98.4% of TIGR00001, 61.9 bits

BL1366a 50S ribosomal protein L35 (NCBI) from Bifidobacterium longum NCC2705
Aligns to 2:64 / 64 (98.4%), covers 98.4% of TIGR00001, 59.9 bits

RB7117 similar to 50S ribosomal protein L35 (NCBI) from Pirellula sp. 1
RB7117 50S ribosomal protein L35 from Rhodopirellula baltica SH 1
Aligns to 116:178 / 181 (34.8%), covers 95.2% of TIGR00001, 53.5 bits

Or search for genetic data about TIGR00001 in the Fitness Browser

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory