Other Characterized Proteins Similar to carB

GapMind for Amino acid biosynthesis

Other Characterized Proteins Similar to carB

Finding the characterized proteins for carB (carbamoyl phosphate synthase subunit beta) in L-arginine biosynthesis

Or see clustering for step carB

Or see all steps for L-arginine biosynthesis

Or cluster curated proteins matching a keyword

Definition of carB

Curated proteins matching carbamoyl-phosphate synthetase%large
Curated proteins matching carbamoyl-phosphate synthase%large
Ignore hits to items matching EC 6.3.5.5 when looking for 'other' hits
Ignore hits to items matching EC 6.3.4.16 when looking for 'other' hits
HMM TIGR01369

Fetched 4 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 18 other characterized sequences. (Found 22 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for carB.)

O50302 carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5) from Geobacillus stearothermophilus
PFams: CPSase_L_D2, Dala_Dala_lig_C, CPSase_L_D3, ATP-grasp_3, CPSase_L_D2, GARS_A, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
1064 amino acids: PaperBLAST, CDD, BRENDA::O50302
78% identical to

P25994 pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) (EC 6.3.5.5) from Bacillus subtilis (strain 168)
CARB_BACSU / P25994 Carbamoyl-phosphate synthase pyrimidine-specific large chain; Carbamoyl-phosphate synthetase ammonia chain; EC 6.3.5.5 from Bacillus subtilis (strain 168)
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, ATP-grasp_3, CPSase_L_D2, GARS_A, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
Heteromeric, 1071 amino acids: PaperBLAST, CDD

Q8RSS3 carbamoyl-phosphate synthase (glutamine-hydrolysing) (subunit 1/2) (EC 6.3.5.5) from Halomonas eurihalina
PFams: CPSase_L_D2, CPSase_L_D3, CPSase_L_D2, ATP-grasp_3, ATP-grasp, Dala_Dala_lig_C, MGS
Heteromeric, 1076 amino acids: PaperBLAST, CDD, BRENDA::Q8RSS3
72% identical to

b0033 carbamoyl phosphate synthetase subunit β (EC 6.3.5.5) from Escherichia coli K-12 substr. MG1655
P00968 carbamoyl-phosphate synthetase large subunit (EC 6.3.5.5) from Escherichia coli (strain K12)
P00968 carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5) from Escherichia coli
CH_002132 carbamoyl phosphate synthase, large subunit; EC 6.3.5.5 from Escherichia coli
PFams: CPSase_L_D2, CPSase_L_D3, CPSase_L_D2, ATP-grasp_3, ATP-grasp, Dala_Dala_lig_C, MGS
Heteromeric, 1073 amino acids: PaperBLAST, CDD

B2G3Q3 carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5) from Streptococcus thermophilus
PFams: CPSase_L_D2, Dala_Dala_lig_C, CPSase_L_D3, ATP-grasp_3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS
1059 amino acids: PaperBLAST, CDD, BRENDA::B2G3Q3
68% identical to

G4MS82 carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5) from Pyricularia oryzae
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C
1179 amino acids: PaperBLAST, CDD, BRENDA::G4MS82
67% identical to

P03965 carbamoyl phosphate synthetase (EC 6.3.5.5) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
CARB_YEAST / P03965 Carbamoyl-phosphate synthase arginine-specific large chain; Arginine-specific carbamoyl-phosphate synthetase, ammonia chain; EC 6.3.5.5 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
Heteromeric, 1118 amino acids: PaperBLAST, CDD

P07259 carbamoyl phosphate synthase/aspartate carbamoyltransferase (EC 2.1.3.2; EC 6.3.5.5) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
PYR1_YEAST / P07259 Protein URA2; EC 6.3.5.5; EC 2.1.3.2 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS, OTCace_N, OTCace
2214 amino acids: PaperBLAST, CDD, SwissProt::P07259
55% identical to

CH_122562 protein pyrABCN [Includes glutamine-dependent carbamoyl-phosphate; Aspartate carbamoyltransferase]; EC 2.1.3.2; EC 6.3.5.5 from Emericella nidulans
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, OTCace_N, OTCace
2275 amino acids: PaperBLAST, CDD, CharProtDB::CH_122562
53% identical to

PYR1_SCHPO / Q09794 Protein ura1; EC 6.3.5.5; EC 2.1.3.2 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
RF|NP_593055.1 carbamoyl-phosphate synthase (glutamine hydrolyzing), aspartate carbamoyltransferase Ura1; EC 2.1.3.2; EC 3.5.2.3; EC 6.3.5.5 from Schizosaccharomyces pombe
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, OTCace_N, OTCace
2244 amino acids: PaperBLAST, CDD, CharProtDB::CH_125552
55% identical to

PYR1_SQUAC / Q91437 CAD protein; EC 6.3.5.5; EC 2.1.3.2; EC 3.5.2.3 from Squalus acanthias (Spiny dogfish)
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, Amidohydro_1, OTCace_N, OTCace
2242 amino acids: PaperBLAST, CDD, SwissProt::Q91437
53% identical to

P27708 CAD protein (EC 3.5.2.3; EC 6.3.5.5; EC 2.1.3.2) from Homo sapiens
PYR1_HUMAN / P27708 CAD protein; EC 6.3.5.5; EC 2.1.3.2; EC 3.5.2.3 from Homo sapiens (Human)
P27708 aspartate carbamoyltransferase (EC 2.1.3.2); dihydroorotase (EC 3.5.2.3); carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5) from Homo sapiens
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, Amidohydro_1, OTCace_N, OTCace
2225 amino acids: PaperBLAST, CDD, BRENDA::P27708
54% identical to

PYR1_DROME / P05990 CAD protein; Protein rudimentary; EC 6.3.5.5; EC 2.1.3.2; EC 3.5.2.3 from Drosophila melanogaster (Fruit fly)
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, Dala_Dala_lig_C, CPSase_L_D3, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D2, MGS, Amidohydro_1, OTCace_N, OTCace
2224 amino acids: PaperBLAST, CDD, SwissProt::P05990
53% identical to

PYR1_MESAU / P08955 CAD protein; EC 6.3.5.5; EC 2.1.3.2; EC 3.5.2.3 from Mesocricetus auratus (Golden hamster)
P08955 dihydroorotase (EC 3.5.2.3) from Mesocricetus auratus
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, Amidohydro_1, OTCace_N, OTCace
2225 amino acids: PaperBLAST, CDD, BRENDA::P08955
54% identical to

PYR1_CAEEL / Q18990 CAD protein; EC 6.3.5.5; EC 2.1.3.2; EC 3.5.2.3 from Caenorhabditis elegans
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS, Amidohydro_1, OTCace_N, OTCace
2198 amino acids: PaperBLAST, CDD, SwissProt::Q18990
52% identical to

P31327 ammonia-dependent carbamoyl-phosphate synthase (EC 6.3.4.16) from Homo sapiens
CPSM_HUMAN / P31327 Carbamoyl-phosphate synthase [ammonia], mitochondrial; Carbamoyl-phosphate synthetase I; CPSase I; EC 6.3.4.16 from Homo sapiens (Human)
P31327 carbamoyl-phosphate synthase (ammonia) (EC 6.3.4.16) from Homo sapiens
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, MGS
1500 amino acids: PaperBLAST, CDD, BRENDA::P31327
51% identical to

CPSM_RAT / P07756 Carbamoyl-phosphate synthase [ammonia], mitochondrial; Carbamoyl-phosphate synthetase I; CPSase I; EC 6.3.4.16 from Rattus norvegicus (Rat)
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS
1500 amino acids: PaperBLAST, CDD, SwissProt::P07756
51% identical to

CPSM_MOUSE / Q8C196 Carbamoyl-phosphate synthase [ammonia], mitochondrial; Carbamoyl-phosphate synthetase I; CPSase I; EC 6.3.4.16 from Mus musculus (Mouse)
Q8C196 carbamoyl-phosphate synthase (ammonia) (EC 6.3.4.16) from Mus musculus
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS
1500 amino acids: PaperBLAST, CDD, BRENDA::Q8C196
51% identical to

BT3866 ammonium-dependent carbamoyl phosphate synthetase CarB2 (EC 6.3.4.16) from Bacteroides thetaiotaomicron VPI-5482
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, CPSase_L_D2, Dala_Dala_lig_C, ATP-grasp, MGS
1073 amino acids: PaperBLAST, CDD, reanno::Btheta:353392
50% identical to

O15830 carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5) from Trypanosoma cruzi
PFams: CPSase_sm_chain, GATase, Peptidase_C26, CPSase_L_D2, CPSase_L_D3, ATP-grasp, CPSase_L_D2
1524 amino acids: PaperBLAST, CDD, BRENDA::O15830
48% identical to

O15829 carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5) from Leishmania mexicana
PFams: CPSase_sm_chain, GATase, CPSase_L_D2, CPSase_L_D3, CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, MGS
1520 amino acids: PaperBLAST, CDD, BRENDA::O15829
48% identical to