Other Characterized Proteins Similar to iolD

GapMind for catabolism of small carbon sources

Other Characterized Proteins Similar to iolD

Finding the characterized proteins for iolD (3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase) in myo-inositol catabolism

Or see clustering for step iolD

Or see all steps for myo-inositol catabolism

Or cluster curated proteins matching a keyword

Definition of iolD

Curated proteins or TIGRFams with EC 3.7.1.22
Ignore hits to items matching epi-inositol hydrolase when looking for 'other' hits
Comment: Erroneous annotations of epi-inositol hydrolases from SEED were "confirmed" by the fitness data and included in reannotations; these are all ignored.

Fetched 2 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 9 other characterized sequences. (Found 11 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for iolD.)

SMc01166 Epi-inositol hydrolase (EC 3.7.1.-) from Sinorhizobium meliloti 1021
PFams: TPP_enzyme_N, TPP_enzyme_M, TPP_enzyme_C
617 amino acids: PaperBLAST, CDD, reanno::Smeli:SMc01166
72% identical to

Q9L3I0 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening) (EC 3.7.1.22) from Rhizobium leguminosarum
PFams: TPP_enzyme_N, TPP_enzyme_M, TPP_enzyme_C
626 amino acids: PaperBLAST, CDD

HSERO_RS12130 Epi-inositol hydrolase (EC 3.7.1.-) from Herbaspirillum seropedicae SmR1
PFams: TPP_enzyme_N, TPP_enzyme_M, TPP_enzyme_C
625 amino acids: PaperBLAST, CDD, reanno::HerbieS:HSERO_RS12130
57% identical to

AO353_21360 Epi-inositol hydrolase (EC 3.7.1.-) from Pseudomonas fluorescens FW300-N2E3
PFams: TPP_enzyme_N, TPP_enzyme_M, TPP_enzyme_C
643 amino acids: PaperBLAST, CDD, reanno::pseudo3_N2E3:AO353_21360
55% identical to

P42415 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase (EC 3.7.1.22) from Bacillus subtilis (strain 168)
IOLD_BACSU / P42415 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; THcHDO hydrolase; EC 3.7.1.22 from Bacillus subtilis (strain 168)
P42415 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening) (EC 3.7.1.22) from Bacillus subtilis
PFams: TPP_enzyme_N, TPP_enzyme_M, TPP_enzyme_C
637 amino acids: PaperBLAST, CDD

Pf1N1B4_4279 Epi-inositol hydrolase (EC 3.7.1.-) from Pseudomonas fluorescens FW300-N1B4
PFams: TPP_enzyme_N, TPP_enzyme_M, TPP_enzyme_C
643 amino acids: PaperBLAST, CDD, reanno::pseudo1_N1B4:Pf1N1B4_4279
55% identical to

AO356_23185 Epi-inositol hydrolase (EC 3.7.1.-) from Pseudomonas fluorescens FW300-N2C3
PFams: TPP_enzyme_N, TPP_enzyme_M, TPP_enzyme_C
643 amino acids: PaperBLAST, CDD, reanno::pseudo5_N2C3_1:AO356_23185
54% identical to

PS417_11870 Epi-inositol hydrolase (EC 3.7.1.-) from Pseudomonas simiae WCS417
PFams: TPP_enzyme_N, TPP_enzyme_M, TPP_enzyme_C
643 amino acids: PaperBLAST, CDD, reanno::WCS417:GFF2328
54% identical to

Pf6N2E2_517 Epi-inositol hydrolase (EC 3.7.1.-) from Pseudomonas fluorescens FW300-N2E2
PFams: TPP_enzyme_N, TPP_enzyme_M, TPP_enzyme_C
643 amino acids: PaperBLAST, CDD, reanno::pseudo6_N2E2:Pf6N2E2_517
54% identical to

BWI76_RS03090 Epi-inositol hydrolase (EC 3.7.1.-) from Klebsiella michiganensis M5al
PFams: TPP_enzyme_N, TPP_enzyme_M, TPP_enzyme_C
646 amino acids: PaperBLAST, CDD, reanno::Koxy:BWI76_RS03090
54% identical to

PGA1_c07250 Epi-inositol hydrolase (EC 3.7.1.-) from Phaeobacter inhibens BS107
PFams: TPP_enzyme_N, TPP_enzyme_M, TPP_enzyme_C
624 amino acids: PaperBLAST, CDD, reanno::Phaeo:GFF710
47% identical to