Clusters of Characterized Proteins

Clustering the characterized proteins for Psest_0084 (2-oxoglutarate TRAP transporter, fused 4TM/12TM components) in 2-oxoglutarate (alpha-ketoglutarate) catabolism

Or see other characterized proteins similar to Psest_0084

Or see all steps for 2-oxoglutarate (alpha-ketoglutarate) catabolism

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Definition of Psest_0084

• Curated sequence GFF84: alpha-ketoglutarate TRAP transporter, 4TM/12TM components
• UniProt sequence A8LI82: SubName: Full=TRAP transporter {ECO:0000313|EMBL:ABV92936.1};
• UniProt sequence E4PQE4: SubName: Full=TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:ADP96487.1};

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 674-743 amino acids (1/3 heteromeric)

E4PQE4 TRAP transporter, 4TM/12TM fusion protein
729 amino acids: PaperBLAST, CDD, Compare to cluster

A8LI82 TRAP transporter
743 amino acids: PaperBLAST, CDD, Compare to cluster

Psest_0084 alpha-ketoglutarate TRAP transporter, 4TM/12TM components from Pseudomonas stutzeri RCH2
PFams: DctM, DctM
Heteromeric, 674 amino acids: PaperBLAST, CDD, Compare to cluster