Clusters of Characterized Proteins

Steps in 4-hydroxybenzoate catabolism

Cluster the charaterized proteins for a step:

• Ch1CoA: cyclohex-1-ene-1-carbonyl-CoA dehydrogenase
• ackA: acetate kinase
• acs: acetyl-CoA synthetase, AMP-forming
• adh: acetaldehyde dehydrogenase (not acylating)
• ald-dh-CoA: acetaldehyde dehydrogenase, acylating
• atoB: acetyl-CoA C-acetyltransferase
• badH: 2-hydroxy-cyclohexanecarboxyl-CoA dehydrogenase
• badI: 2-ketocyclohexanecarboxyl-CoA hydrolase
• badK: cyclohex-1-ene-1-carboxyl-CoA hydratase
• bamB: class II benzoyl-CoA reductase, BamB subunit
• bamC: class II benzoyl-CoA reductase, BamC subunit
• bamD: class II benzoyl-CoA reductase, BamD subunit
• bamE: class II benzoyl-CoA reductase, BamE subunit
• bamF: class II benzoyl-CoA reductase, BamF subunit
• bamG: class II benzoyl-CoA reductase, BamG subunit
• bamH: class II benzoyl-CoA reductase, BamH subunit
• bamI: class II benzoyl-CoA reductase, BamI subunit
• bcrA: ATP-dependent benzoyl-CoA reductase, alpha subunit
• bcrB: ATP-dependent benzoyl-CoA reductase, beta subunit
• bcrC: ATP-dependent benzoyl-CoA reductase, gamma subunit
• bcrD: ATP-dependent benzoyl-CoA reductase, delta subunit
• boxA: benzoyl-CoA epoxidase, subunit A
• boxB: benzoyl-CoA epoxidase, subunit B
• boxC: 2,3-epoxybenzoyl-CoA dihydrolase
• boxD: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase
• catI: 3-oxoadipate CoA-transferase subunit A (CatI)
• catJ: 3-oxoadipate CoA-transferase subunit B (CatJ)
• dch: cyclohexa-1,5-diene-1-carboxyl-CoA hydratase
• ech: (S)-3-hydroxybutanoyl-CoA hydro-lyase
• fadB: (S)-3-hydroxybutanoyl-CoA dehydrogenase
• fcbT1: tripartite 4-hydroxybenzoate transporter, substrate-binding component FcbT1
• fcbT2: tripartite 4-hydroxybenzoate transporter, small DctQ-like component FcbT2
• fcbT3: tripartite 4-hydroxybenzoate transporter, large permease subunit FcbT3
• gcdH: glutaryl-CoA dehydrogenase
• had: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase
• hcl: 4-hydroxybenzoyl-CoA ligase
• hcrA: 4-hydroxybenzoyl-CoA reductase, alpha subunit
• hcrB: 4-hydroxybenzoyl-CoA reductase, beta subunit
• hcrC: 4-hydroxybenzoyl-CoA reductase, gamma subunit
• ligA: protocatechuate 4,5-dioxygenase, alpha subunit
• ligB: protocatechuate 4,5-dioxygenase, beta subunit
• ligC: 2-hydroxy-4-carboxymuconate-6-semialdehyde dehydrogenase
• ligI: 2-pyrone-4,6-dicarboxylate hydrolase
• ligJ: 4-carboxy-2-hydroxymuconate hydratase
• ligK: 4-oxalocitramalate aldolase
• ligU: 4-oxalomesaconate tautomerase
• mhpD: 2-hydroxypentadienoate hydratase
• mhpE: 4-hydroxy-2-oxovalerate aldolase
• oah: 6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase
• paaF: 2,3-dehydroadipyl-CoA hydratase
• paaH: 3-hydroxyadipyl-CoA dehydrogenase
• paaJ2: 3-oxoadipyl-CoA thiolase
• pcaB: 3-carboxymuconate cycloisomerase
• pcaC: 4-carboxymuconolactone decarboxylase
• pcaD: 3-oxoadipate enol-lactone hydrolase
• pcaF: succinyl-CoA:acetyl-CoA C-succinyltransferase
• pcaG: protocatechuate 3,4-dioxygenase, beta subunit
• pcaH: protocatechuate 3,4-dioxygenase, alpha subunit
• pcaI: 3-oxoadipate CoA-transferase subunit A (PcaI)
• pcaJ: 3-oxoadipate CoA-transferase subunit B (PcaJ)
• pcaK: 4-hydroxybenzoate transporter pcaK
• pimB: 3-oxopimeloyl-CoA:CoA acetyltransferase
• pimC: pimeloyl-CoA dehydrogenase, small subunit
• pimD: pimeloyl-CoA dehydrogenase, large subunit
• pimF: 6-carboxyhex-2-enoyl-CoA hydratase
• pobA: 4-hydroxybenzoate 3-monooxygenase
• praA: protocatechuate 2,3-dioxygenase
• praB: 2-hydroxymuconate 6-semialdehyde dehydrogenase
• praC: 2-hydroxymuconate tautomerase
• praD: 2-oxohex-3-enedioate decarboxylase
• pta: phosphate acetyltransferase
• xylF: 2-hydroxymuconate semialdehyde hydrolase

Or see an overview of 4-hydroxybenzoate catabolism

Or see all pathways