Clusters of Characterized Proteins

Clustering the characterized proteins for ligJ (4-carboxy-2-hydroxymuconate hydratase) in 4-hydroxybenzoate catabolism

Or see other characterized proteins similar to ligJ

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Definition of ligJ

• Curated proteins or TIGRFams with EC 4.2.1.83
• Curated sequence G2IQQ5: 2-keto-4-carboxy-3-hexenedioate hydratase; KCH hydratase; EC 4.2.1.-
• Comment: SwissProt G2IQQ5 = ligJ is described as using the enol form, (3Z)-2-oxo-4-carboxy-3-hexenedioate, of the substrate, but it yields the same product

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 341-342 amino acids (not heteromeric)

LIGJ_SPHSK / G2IQQ5 2-keto-4-carboxy-3-hexenedioate hydratase; KCH hydratase; EC 4.2.1.- from Sphingobium sp. (strain NBRC 103272 / SYK-6)
PFams: Amidohydro_2
341 amino acids: PaperBLAST, CDD, Compare to cluster

Q93PS9 4-carboxy-2-hydroxymuconate hydratase (EC 4.2.1.83) from Comamonas testosteroni
Q93PS9 4-oxalomesaconate hydratase (EC 4.2.1.83) from Comamonas testosteroni
PFams: Amidohydro_2
342 amino acids: PaperBLAST, CDD, Compare to cluster

Q9AQI1 subunit of 4-oxalomesaconate hydratase (EC 4.2.1.83) from Pseudomonas straminea
PFams: Amidohydro_2
342 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

GALB_PSEPK / Q88JX8 4-oxalmesaconate hydratase; OMA hydratase; Gallate degradation protein B; EC 4.2.1.83 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
PFams: PIG-L
258 amino acids: PaperBLAST, CDD