GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for pobA (4-hydroxybenzoate 3-monooxygenase) in 4-hydroxybenzoate catabolism

Or see other characterized proteins similar to pobA

Or see all steps for 4-hydroxybenzoate catabolism

Or cluster curated proteins matching a keyword

Definition of pobA

Fetched 9 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 7 of these sequences

Found 1 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 389-402 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

PRAI_PAESP / C4TP09 4-hydroxybenzoate 3-monooxygenase (NAD(P)H); 4-hydroxybenzoate 3-hydroxylase; 4HB 3-hydroxylase; EC 1.14.13.33 from Paenibacillus sp.
PFams: FAD_binding_3
394 amino acids: PaperBLAST, CDD, Compare to cluster

P00438 p-hydroxybenzoate hydroxylase (EC 1.14.13.2) from Pseudomonas fluorescens
PHHY_PSEFL / P00438 p-hydroxybenzoate hydroxylase; PHBH; PHBHase; 4-hydroxybenzoate 3-monooxygenase; EC 1.14.13.2 from Pseudomonas fluorescens
PFams: FAD_binding_3
394 amino acids: PaperBLAST, CDD, Compare to cluster

PHHY_PSEAE / P20586 p-hydroxybenzoate hydroxylase; PHBH; 4-hydroxybenzoate 3-monooxygenase; EC 1.14.13.2 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
PFams: FAD_binding_3
394 amino acids: PaperBLAST, CDD, Compare to cluster

Q9R9T1 p-hydroxybenzoate hydroxylase (EC 1.14.13.2) from Pseudomonas putida
Q9R9T1 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Pseudomonas putida
PFams: FAD_binding_3
395 amino acids: PaperBLAST, CDD, Compare to cluster

F2JUE7 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1)
PFams: FAD_binding_3
402 amino acids: PaperBLAST, CDD, Compare to cluster

RR42_RS21940 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Cupriavidus basilensis 4G11
PFams: FAD_binding_3
389 amino acids: PaperBLAST, CDD, Compare to cluster

Pf6N2E2_2914 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Pseudomonas fluorescens FW300-N2E2
PFams: FAD_binding_3
396 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/2 heteromeric)

MOBA_COMTE / Q6SSJ6 3-hydroxybenzoate 4-monooxygenase; 3-hydroxybenzoate 4-hydroxylase; M-hydroxybenzoate hydroxylase; EC 1.14.13.23 from Comamonas testosteroni (Pseudomonas testosteroni)
Q6SSJ6 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2); 3-hydroxybenzoate 4-monooxygenase (EC 1.14.13.23) from Comamonas testosteroni
PFams: FAD_binding_3, Lycopene_cycl, Phe_hydrox_dim
639 amino acids: PaperBLAST, CDD

A0A1S6M1N0 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) from Hormoscilla spongeliae SP12
PFams: p450
453 amino acids: PaperBLAST, CDD