GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for kauB (4-guanidinobutyraldehyde dehydrogenase) in L-arginine catabolism

Or see other characterized proteins similar to kauB

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Or cluster curated proteins matching a keyword

Definition of kauB

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 497-497 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q88CA3 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
PFams: Aldedh
497 amino acids: PaperBLAST, CDD, Compare to cluster

PS417_27745 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.54) from Pseudomonas simiae WCS417
PFams: Aldedh
497 amino acids: PaperBLAST, CDD, Compare to cluster

PfGW456L13_805 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.54) from Pseudomonas fluorescens GW456-L13
PFams: Aldedh
497 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_12580 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.54) from Pseudomonas fluorescens FW300-N2C3
PFams: Aldedh
497 amino acids: PaperBLAST, CDD, Compare to cluster

Pf6N2E2_4383 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.54) from Pseudomonas fluorescens FW300-N2E2
PFams: Aldedh
497 amino acids: PaperBLAST, CDD, Compare to cluster