Clusters of Characterized Proteins

Clustering the characterized proteins for acaP (aspartate permease AcaP) in L-aspartate catabolism

Or see other characterized proteins similar to acaP

Or see all steps for L-aspartate catabolism

Or cluster curated proteins matching a keyword

Definition of acaP

• Curated sequence A2RL65: Aspartate/glutamate permease AcaP
• Curated sequence F2HJG8: Aspartate/Glutamate transporter of 488 aas and 12 TMSs, AcaP
• Ignore hits to P75835 when looking for 'other' hits (The GadC homologue)
• Comment: Ignore E. coli YcaM which does not seem to be characterized

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 488-489 amino acids (not heteromeric)

ACAP_LACLM / A2RL65 Aspartate/glutamate permease AcaP from Lactococcus lactis subsp. cremoris (strain MG1363)
PFams: AA_permease_2, AA_permease
489 amino acids: PaperBLAST, CDD, Compare to cluster

TC 2.A.3.7.6 / F2HJG8 Aspartate/Glutamate transporter of 488 aas and 12 TMSs, AcaP from Lactococcus lactis subsp. lactis (strain CV56)
PFams: AA_permease_2, AA_permease
488 amino acids: PaperBLAST, CDD, Compare to cluster