Clusters of Characterized Proteins

Clustering the characterized proteins for bztA (aspartate/asparagine ABC transporter, substrate-binding component BztA) in L-aspartate catabolism

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Definition of bztA

• Curated sequence Q52663: BztA, component of Glutamate/glutamine/aspartate/asparagine porter
• Ignore hits to Q52812 when looking for 'other' hits (AapJ, component of General L-amino acid porter; transports basic and acidic amino acids preferentially, but also transports aliphatic amino acids (catalyzes both uptake and efflux))
• Ignore hits to SMc02118 when looking for 'other' hits (ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, periplasmic substrate-binding component)
• Comment: BztABCD from Rhodobacter capsulatus (Rhodopseudomonas capsulata), TC 3.A.1.3.7. Ignore similarity of bztA to general amino acid porter AapJ and to broad transporter SMc02118.

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (1/1 heteromeric)

TC 3.A.1.3.7 / Q52663 BztA, component of Glutamate/glutamine/aspartate/asparagine porter from Rhodobacter capsulatus (Rhodopseudomonas capsulata)
PFams: SBP_bac_3
Heteromeric, 338 amino acids: PaperBLAST, CDD