Clusters of Characterized Proteins

Clustering the characterized proteins for TM0030 (cellobiose ABC transporter, permease component 1) in D-cellobiose catabolism

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Definition of TM0030

• Curated sequence Q9WXN7: TM0030, component of β-glucoside porter (Conners et al., 2005). Binds cellobiose, laminaribiose (Nanavati et al. 2006). Regulated by cellobiose-responsive repressor BglR
• Ignore hits to Q9X0U9 when looking for 'other' hits (TM1222, component of Probable cellobiose porter. Induced by barley, glucomannan)

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (1/1 heteromeric)

TC 3.A.1.5.16 / Q9WXN7 TM0030, component of β-glucoside porter (Conners et al., 2005). Binds cellobiose, laminaribiose (Nanavati et al. 2006). Regulated by cellobiose-responsive repressor BglR
PFams: BPD_transp_1
Heteromeric, 338 amino acids: PaperBLAST, CDD