GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for ptsG (glucose PTS, enzyme IICB) in D-cellobiose catabolism

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Or cluster curated proteins matching a keyword

Definition of ptsG

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 477-477 amino acids (1/2 heteromeric)

The first sequence in each cluster is the seed.

b1101 glucose-specific PTS enzyme IIBC component (EC 2.7.1.199) from Escherichia coli K-12 substr. MG1655
P69786 glucose-specific PTS enzyme IIBC component (EC 2.7.1.199) from Escherichia coli (strain K12)
PTGCB_ECOLI / P69786 PTS system glucose-specific EIICB component; EIICB-Glc; EII-Glc; EC 2.7.1.199 from Escherichia coli (strain K12)
P69786 protein-Npi-phosphohistidine-D-glucose phosphotransferase (EC 2.7.1.199) from Escherichia coli
TC 4.A.1.1.1 / P69786 PTS system glucose-specific EIICB component PTGB aka PTSG aka GLCA aka UMG aka B1101, component of Glucose porter (PtsG; GlcA; Umg) (transports D-glucose and α-methyl-D-glucopyranoside) from Escherichia coli
MB|P69786 PTS system glucose-specific EIICB component; EC 2.7.1.69 from Escherichia coli K12
PFams: PTS_EIIC, PTS_EIIB
Heteromeric, 477 amino acids: PaperBLAST, CDD, Compare to cluster

PTGCB_SALTY / P37439 PTS system glucose-specific EIICB component; EIICB-Glc; EII-Glc; EC 2.7.1.199 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
PFams: PTS_EIIC, PTS_EIIB
477 amino acids: PaperBLAST, CDD, Compare to cluster