GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for aroC (chorismate synthase) in chorismate biosynthesis

Or see other characterized proteins similar to aroC

Or see all steps for chorismate biosynthesis

Or cluster curated proteins matching a keyword

Definition of aroC

Fetched 12 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 11 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 361-442 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

B5AAU3 chorismate synthase (EC 4.2.3.5) from Hordeum vulgare
PFams: Chorismate_synt
442 amino acids: PaperBLAST, CDD, Compare to cluster

C8Z2I6 chorismate synthase (EC 4.2.3.5) from Verticillium longisporum
PFams: Chorismate_synt
408 amino acids: PaperBLAST, CDD, Compare to cluster

Q71Y87 chorismate synthase (EC 4.2.3.5) from Listeria monocytogenes
PFams: Chorismate_synt
388 amino acids: PaperBLAST, CDD, Compare to cluster

AROC_AQUAE / O66493 Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5 from Aquifex aeolicus (strain VF5)
PFams: Chorismate_synt
398 amino acids: PaperBLAST, CDD, Compare to cluster

AROC_STRPN / P0A2Y6 Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5 from Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
PFams: Chorismate_synt
388 amino acids: PaperBLAST, CDD, Compare to cluster

b2329 chorismate synthase (EC 4.2.3.5) from Escherichia coli K-12 substr. MG1655
P12008 chorismate synthase (EC 4.2.3.5) from Escherichia coli (strain K12)
AROC_ECOLI / P12008 Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EPSP phospholyase; EC 4.2.3.5 from Escherichia coli (strain K12)
PFams: Chorismate_synt
361 amino acids: PaperBLAST, CDD, Compare to cluster

AROC_YEAST / P28777 Chorismate synthase ARO2; 5-enolpyruvylshikimate-3-phosphate phospholyase; Aromatic amino acid requiring protein 2; EC 1.5.1.38; EC 4.2.3.5 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: Chorismate_synt
376 amino acids: PaperBLAST, CDD, Compare to cluster

AROC_HELPY / P56122 Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5 from Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
PFams: Chorismate_synt
365 amino acids: PaperBLAST, CDD, Compare to cluster

AROC_MYCTU / P9WPY1 Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
PFams: Chorismate_synt
401 amino acids: PaperBLAST, CDD, Compare to cluster

AROC_NEUCR / Q12640 Chorismate synthase aro-2; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 1.5.1.38; EC 4.2.3.5 from Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
PFams: Chorismate_synt
432 amino acids: PaperBLAST, CDD, Compare to cluster

AROC_STAAU / Q59803 Chorismate synthase; CS; 5-enolpyruvylshikimate-3-phosphate phospholyase; EC 4.2.3.5 from Staphylococcus aureus
PFams: Chorismate_synt
388 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

O15864 chorismate synthase (EC 4.2.3.5) from Plasmodium falciparum
PFams: Chorismate_synt
527 amino acids: PaperBLAST, CDD