Clusters of Characterized Proteins

Clustering the characterized proteins for SLC13A5 (citrate:Na+ symporter) in citrate catabolism

Or see other characterized proteins similar to SLC13A5

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Definition of SLC13A5

• Curated sequence CH_091173: tonoplast dicarboxylate transporter. Tonoplast dicarboxylate transporter; AttDT; Sodium-dicarboxylate cotransporter-like; AtSDAT; Vacuolar malate transporter. The tonoplast dicarboxylate (malate) transporter, AtDCT
• Curated sequence Q86YT5: Solute carrier family 13 member 5; Na(+)/citrate cotransporter; NaCT; Sodium-coupled citrate transporter; Sodium-dependent citrate transporter. Na+-coupled citrate transporter (NaCT) (Km=20 μM) (also may transport dicarboxylates and other tricarboxylates with lower affinity) (Inoue et al., 2002b; Bergeron et al. 2013). Na+:citrate = 3-4:1 (Bergeron et al. 2013). Na+:citrate = 3-4:1
• Curated sequence Q8CJ44: Solute carrier family 13 member 5; Na(+)/citrate cotransporter; NaCT; Sodium-coupled citrate transporter; Sodium-dependent citrate transporter
• Curated sequence Q13183: Solute carrier family 13 member 2 (Na /di- and tricarboxylate cotransporter 1) (NaDC-1) (Renal sodium/dicarboxylate cotransporter)

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 540-592 amino acids (not heteromeric)

TDT_ARATH / Q8LG88 Tonoplast dicarboxylate transporter; AttDT; Sodium-dicarboxylate cotransporter-like; AtSDAT; Vacuolar malate transporter from Arabidopsis thaliana (Mouse-ear cress)
TC 2.A.47.1.6 / Q8LG88 The tonoplast dicarboxylate (malate) transporter, AtDCT
GB|BAA96091.1 tonoplast dicarboxylate transporter from Arabidopsis thaliana
PFams: Na_sulph_symp, CitMHS
540 amino acids: PaperBLAST, CDD, Compare to cluster

S13A5_HUMAN / Q86YT5 Solute carrier family 13 member 5; Na(+)/citrate cotransporter; NaCT; Sodium-coupled citrate transporter; Sodium-dependent citrate transporter from Homo sapiens (Human)
TC 2.A.47.1.9 / Q86YT5 Na+-coupled citrate transporter (NaCT) (Km=20 μM) (also may transport dicarboxylates and other tricarboxylates with lower affinity) (Inoue et al., 2002b; Bergeron et al. 2013). Na+:citrate = 3-4:1 (Bergeron et al. 2013). Na+:citrate = 3-4:1 from Homo sapiens (Human)
PFams: Na_sulph_symp, CitMHS, CitMHS
568 amino acids: PaperBLAST, CDD, Compare to cluster

S13A5_RAT / Q8CJ44 Solute carrier family 13 member 5; Na(+)/citrate cotransporter; NaCT; Sodium-coupled citrate transporter; Sodium-dependent citrate transporter from Rattus norvegicus (Rat)
PFams: Na_sulph_symp, CitMHS, CitMHS
572 amino acids: PaperBLAST, CDD, Compare to cluster

TC 2.A.47.1.17 / Q13183 Solute carrier family 13 member 2 (Na /di- and tricarboxylate cotransporter 1) (NaDC-1) (Renal sodium/dicarboxylate cotransporter) from Homo sapiens
PFams: Na_sulph_symp, CitMHS, CitMHS
592 amino acids: PaperBLAST, CDD, Compare to cluster