Clusters of Characterized Proteins

Clustering the characterized proteins for AO353_03045 (ABC transporter for L-Citrulline, permease component 2) in L-citrulline catabolism

Or see other characterized proteins similar to AO353_03045

Or see all steps for L-citrulline catabolism

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Definition of AO353_03045

• Curated sequence Pf1N1B4_3433: ABC transporter for L-Arginine and L-Citrulline, permease component 2
• Curated sequence AO353_03045: ABC transporter for L-Arginine and L-Citrulline, permease component 1
• Ignore hits to AO356_18710 when looking for 'other' hits (L-Arginine ABC transporter, permease component 1)
• Ignore hits to Pf6N2E2_5662 when looking for 'other' hits (L-Arginine ABC transporter, permease protein AotM)
• Ignore hits to GFF4243 when looking for 'other' hits (ABC transporter for L-Arginine, permease component 2)
• Ignore hits to O50183 when looking for 'other' hits (AotP aka AotM aka PA0890, component of Arginine/ornithine (but not lysine) porter)

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 232-232 amino acids (heteromeric)

Pf1N1B4_3433 ABC transporter for L-Arginine and L-Citrulline, permease component 2 from Pseudomonas fluorescens FW300-N1B4
PFams: BPD_transp_1
Heteromeric, 232 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_03045 ABC transporter for L-Arginine and L-Citrulline, permease component 1 from Pseudomonas fluorescens FW300-N2E3
PFams: BPD_transp_1
Heteromeric, 232 amino acids: PaperBLAST, CDD, Compare to cluster