Clusters of Characterized Proteins

Clustering the characterized proteins for AO353_03050 (ABC transporter for L-Citrulline, permease component 1) in L-citrulline catabolism

Or see other characterized proteins similar to AO353_03050

Or see all steps for L-citrulline catabolism

Or cluster curated proteins matching a keyword

Definition of AO353_03050

• Curated sequence Pf1N1B4_3432: ABC transporter for L-Arginine and L-Citrulline, permease component 1
• Curated sequence AO353_03050: ABC transporter for L-Arginine and L-Citrulline, permease component 2
• Ignore hits to GFF4244 when looking for 'other' hits (ABC transporter for L-Arginine, permease component 1)
• Ignore hits to AO356_18705 when looking for 'other' hits (L-Arginine ABC transporter, permease component 2)
• Ignore hits to Pf6N2E2_5661 when looking for 'other' hits (L-Arginine ABC transporter, permease protein AotQ)
• Ignore hits to CH_107317 when looking for 'other' hits (arginine/ornithine transport protein. AotQ, component of Arginine/ornithine (but not lysine) porter)

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 229-229 amino acids (heteromeric)

Pf1N1B4_3432 ABC transporter for L-Arginine and L-Citrulline, permease component 1 from Pseudomonas fluorescens FW300-N1B4
PFams: BPD_transp_1
Heteromeric, 229 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_03050 ABC transporter for L-Arginine and L-Citrulline, permease component 2 from Pseudomonas fluorescens FW300-N2E3
PFams: BPD_transp_1
Heteromeric, 229 amino acids: PaperBLAST, CDD, Compare to cluster