GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for sepS (O-phosphoseryl-tRNA ligase) in L-cysteine biosynthesis

Or see other characterized proteins similar to sepS

Or see all steps for L-cysteine biosynthesis

Or cluster curated proteins matching a keyword

Definition of sepS

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 534-539 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

O30126 O-phospho-L-serine-tRNA ligase (EC 6.1.1.27) from Archaeoglobus fulgidus
PFams: tRNA-synt_2d, SepRS_C
534 amino acids: PaperBLAST, CDD, Compare to cluster

Q59054 O-phosphoseryl-tRNA ligase monomer (EC 6.1.1.27) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
SEPS_METJA / Q59054 O-phosphoserine--tRNA(Cys) ligase; O-phosphoserine--tRNA ligase; Non-canonical O-phosphoseryl-tRNA(Cys) synthetase; O-phosphoseryl-tRNA(Cys) synthetase; SepRS; EC 6.1.1.27 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Q59054 O-phospho-L-serine-tRNA ligase (EC 6.1.1.27) from Methanocaldococcus jannaschii
PFams: tRNA-synt_2d, tRNA_synthFbeta, SepRS_C
539 amino acids: PaperBLAST, CDD, Compare to cluster