Clusters of Characterized Proteins

Clustering the characterized proteins for drdehyd-alpha (2-deoxy-D-ribose dehydrogenase, alpha subunit) in 2-deoxy-D-ribose catabolism

Or see other characterized proteins similar to drdehyd-alpha

Or see all steps for 2-deoxy-D-ribose catabolism

Or cluster curated proteins matching a keyword

Definition of drdehyd-alpha

• Curated proteins matching deoxy%ribose dehydrogenase%alpha
• Ignore hits to items matching vanillin dehydrogenase when looking for 'other' hits
• Comment: This three-component periplasmic (probably) dehydrogenase seems to be non-specific, but it is the only known way to convert deoxyribose to deoxyribonate. (Oxidative damage of DNA and archaeal glycolysis may also be sources of deoxyribonate.) It probably forms 1,5-lactone, but since that is uncertain, the lactonase is not included in this pathway definition

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (1/1 heteromeric)

PS417_10890 Deoxyribose 1-dehydrogenase, alpha subunit from Pseudomonas simiae WCS417
A0A1N7UJP4 2-deoxy-D-ribose dehydrogenase α subunit from Pseudomonas simiae
PFams: Fer2, Fer2_2
Heteromeric, 151 amino acids: PaperBLAST, CDD