Clusters of Characterized Proteins

GapMind for catabolism of small carbon sources

Clusters of Characterized Proteins

Clustering the characterized proteins for adhAqn (ethanol dehydrogenase (quinone), subunit I) in ethanol catabolism

Or see other characterized proteins similar to adhAqn

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Definition of adhAqn

Curated sequence Q44002: alcohol dehydrogenase (quinone) (EC 1.1.5.5)
Curated sequence P18278: alcohol dehydrogenase (quinone) (EC 1.1.5.5)
Curated sequence Q93RE9: alcohol dehydrogenase (quinone) (EC 1.1.5.5)
Curated sequence O05542: Alcohol dehydrogenase (quinone), dehydrogenase subunit; ADH; Alcohol dehydrogenase (quinone), acceptor subunit; Alcohol dehydrogenase (quinone), subunit I; Ethanol:Q2 reductase; G3-ADH subunit I; Quinohemoprotein alcohol dehydrogenase; Quinohemoprotein-cytochrome c complex; Ubiquinol oxidase; EC 1.1.5.5. alcohol dehydrogenase acceptor subunit (EC 1.1.5.5)
Curated sequence P28036: Alcohol dehydrogenase (quinone), dehydrogenase subunit; ADH; Alcohol dehydrogenase (quinone), acceptor subunit; Alcohol dehydrogenase (quinone), subunit I; Ethanol:Q2 reductase; G3-ADH subunit I; Quinohemoprotein alcohol dehydrogenase; Quinohemoprotein-cytochrome c complex; Ubiquinol oxidase; EC 1.1.5.5
Ignore hits to items matching 1.1.2.8 when looking for 'other' hits
Comment: (The enzyme from Zymomonas is NAD-dependent, but is misannotated as quinone-dependent in MetaCyc.)

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 608-757 amino acids (1/5 heteromeric)

The first sequence in each cluster is the seed.

Q44002 alcohol dehydrogenase (quinone) (EC 1.1.5.5) from Komagataeibacter europaeus
PFams: PQQ_2, PQQ, PQQ_3, PQQ, PQQ_2, PQQ_3, Cytochrome_CBB3
739 amino acids: PaperBLAST, CDD, Compare to cluster

P18278 alcohol dehydrogenase (quinone) (EC 1.1.5.5) from Acetobacter aceti
PFams: PQQ, PQQ_2, PQQ, PQQ, PQQ_2, PQQ_3, Cytochrome_CBB3
742 amino acids: PaperBLAST, CDD, Compare to cluster

Q93RE9 alcohol dehydrogenase (quinone) (EC 1.1.5.5) from Pseudogluconobacter saccharoketogenes
PFams: PQQ_2, PQQ_3, PQQ, PQQ_2, PQQ_3, PQQ
608 amino acids: PaperBLAST, CDD, Compare to cluster

O05542 alcohol dehydrogenase acceptor subunit (EC 1.1.5.5) from Gluconobacter oxydans (strain 621H)
ADHA_GLUOX / O05542 Alcohol dehydrogenase (quinone), dehydrogenase subunit; ADH; Alcohol dehydrogenase (quinone), acceptor subunit; Alcohol dehydrogenase (quinone), subunit I; Ethanol:Q2 reductase; G3-ADH subunit I; Quinohemoprotein alcohol dehydrogenase; Quinohemoprotein-cytochrome c complex; Ubiquinol oxidase; EC 1.1.5.5 from Gluconobacter oxydans (strain 621H) (Gluconobacter suboxydans)
PFams: PQQ_2, PQQ, PQQ_3, PQQ, PQQ, Cytochrome_CBB3
Heteromeric, 757 amino acids: PaperBLAST, CDD, Compare to cluster

ADHA_GLUPO / P28036 Alcohol dehydrogenase (quinone), dehydrogenase subunit; ADH; Alcohol dehydrogenase (quinone), acceptor subunit; Alcohol dehydrogenase (quinone), subunit I; Ethanol:Q2 reductase; G3-ADH subunit I; Quinohemoprotein alcohol dehydrogenase; Quinohemoprotein-cytochrome c complex; Ubiquinol oxidase; EC 1.1.5.5 from Gluconacetobacter polyoxogenes (Acetobacter polyoxogenes)
PFams: PQQ_2, PQQ, PQQ_3, PQQ, PQQ_2, PQQ_3, Cytochrome_CBB3
738 amino acids: PaperBLAST, CDD, Compare to cluster