Clusters of Characterized Proteins

Clustering the characterized proteins for frcB (fructose ABC transporter, substrate-binding component FrcB) in D-fructose catabolism

Or see other characterized proteins similar to frcB

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Definition of frcB

• Curated sequence Q9F9B2: Fructose import binding protein FrcB. FrcB, component of Fructose/mannose/ribose porter
• UniProt sequence A0A0C4Y591: SubName: Full=Xylose ABC transporter, periplasmic xylose-binding protein XylF {ECO:0000313|EMBL:AJG18105.1};

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 325-341 amino acids (1/2 heteromeric)

FRCB_RHIML / Q9F9B2 Fructose import binding protein FrcB from Rhizobium meliloti (Ensifer meliloti) (Sinorhizobium meliloti)
TC 3.A.1.2.7 / Q9F9B2 FrcB, component of Fructose/mannose/ribose porter from Rhizobium meliloti (Sinorhizobium meliloti)
PFams: Peripla_BP_1, Peripla_BP_4
Heteromeric, 341 amino acids: PaperBLAST, CDD, Compare to cluster

A0A0C4Y591 Xylose ABC transporter, periplasmic xylose-binding protein XylF
325 amino acids: PaperBLAST, CDD, Compare to cluster