Clusters of Characterized Proteins

Clustering the characterized proteins for dctQ (fumarate TRAP transporter, small permease component DctQ) in fumarate catabolism

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Definition of dctQ

• Curated sequence O07837: C4-dicarboxylate TRAP transporter small permease protein DctQ. DctQ, component of Tripartite dicarboxylate:H+ symporter (substrates include: fumarate, D- and L-malate, succinate, succinamide, orotate, iticonate and mesaconate)
• Curated sequence 5208944: dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component
• Ignore hits to 6938089 when looking for 'other' hits (alpha-ketoglutarate TRAP transporter, small permease component)
• UniProt sequence I7EY26: SubName: Full=TRAP transporter, subunit DctQ {ECO:0000313|EMBL:AFO91752.1};

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 3 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (2/3 heteromeric)

DCTQ_RHOCA / O07837 C4-dicarboxylate TRAP transporter small permease protein DctQ from Rhodobacter capsulatus (Rhodopseudomonas capsulata)
TC 2.A.56.1.1 / O07837 DctQ, component of Tripartite dicarboxylate:H+ symporter (substrates include: fumarate, D- and L-malate, succinate, succinamide, orotate, iticonate and mesaconate) from Rhodobacter capsulatus (Rhodopseudomonas capsulata)
PFams: DctQ
Heteromeric, 227 amino acids: PaperBLAST, CDD

I7EY26 TRAP transporter, subunit DctQ
225 amino acids: PaperBLAST, CDD

Shew_1445 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component from Shewanella loihica PV-4
PFams: DctQ
Heteromeric, 212 amino acids: PaperBLAST, CDD