Clusters of Characterized Proteins

Clustering the characterized proteins for PfGW456L13_1894 (ABC transporter for D-Galactose and D-Glucose, periplasmic substrate-binding component) in D-galactose catabolism

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Definition of PfGW456L13_1894

• Curated sequence PfGW456L13_1894: ABC transporter for D-Galactose and D-Glucose, periplasmic substrate-binding component
• Ignore hits to GFF4324 when looking for 'other' hits (ABC transporter for D-Glucose-6-Phosphate, periplasmic substrate-binding component)
• Ignore hits to Q88P38 when looking for 'other' hits (GtsA (GLcE), component of Glucose porter, GtsABCD)
• Comment: Pseudomonas fluorescens has a 4-part transporter. A related system in P. simiae WCS417 is slightly deleterious during growth on galactose, so it could be a galactose transporter; it is marked ignore. A related system is also found in P. putida (gtsABCD), which does not utilize galactose, but similar systems in other Pseudomonas do seem to be involved in galactose transport (i.e., AO356_05195:AO356_05180 from FW300-N2C3), so gtsABCD is also marked ignore..

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Singletons (1/1 heteromeric)

PfGW456L13_1894 ABC transporter for D-Galactose and D-Glucose, periplasmic substrate-binding component from Pseudomonas fluorescens GW456-L13
Heteromeric, 432 amino acids: PaperBLAST, CDD