GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for lacB (galactose-6-phosphate isomerase, lacB subunit) in D-galactose catabolism

Or see other characterized proteins similar to lacB

Or see all steps for D-galactose catabolism

Or cluster curated proteins matching a keyword

Definition of lacB

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 171-171 amino acids (heteromeric)

The first sequence in each cluster is the seed.

LACB_LACLL / P23495 Galactose-6-phosphate isomerase subunit LacB; EC 5.3.1.26 from Lactococcus lactis subsp. lactis (Streptococcus lactis)
PFams: LacAB_rpiB
Heteromeric, 171 amino acids: PaperBLAST, CDD, Compare to cluster

P0C1R6 galactose-6-phosphate isomerase lacB subunit (EC 5.3.1.26) from Staphylococcus aureus
PFams: LacAB_rpiB
Heteromeric, 171 amino acids: PaperBLAST, CDD, Compare to cluster