Clusters of Characterized Proteins

Clustering the characterized proteins for gntC (gluconate TRAP transporter, periplasmic solute-binding component) in D-gluconate catabolism

Or see other characterized proteins similar to gntC

Or see all steps for D-gluconate catabolism

Or cluster curated proteins matching a keyword

Definition of gntC

• UniProt sequence Q930R1: SubName: Full=TRAP-type periplasmic solute-binding protein {ECO:0000313|EMBL:AAK64792.1};
• UniProt sequence G8AR24: SubName: Full=TRAP dicarboxylate transport system, periplasmic component (DctP-like) {ECO:0000313|EMBL:CCC99885.1};
• Curated sequence GFF2082: D-gluconate TRAP transporter, periplasmic component
• UniProt sequence A0A165IVH1: SubName: Full=ABC transporter substrate-binding protein {ECO:0000313|EMBL:KZT13590.1};

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 334-339 amino acids (1/4 heteromeric)

A0A165IVH1 ABC transporter substrate-binding protein
339 amino acids: PaperBLAST, CDD, Compare to cluster

G8AR24 TRAP dicarboxylate transport system, periplasmic component (DctP-like)
337 amino acids: PaperBLAST, CDD, Compare to cluster

Q930R1 TRAP-type periplasmic solute-binding protein
334 amino acids: PaperBLAST, CDD, Compare to cluster

Psest_2125 D-gluconate TRAP transporter, periplasmic component from Pseudomonas stutzeri RCH2
PFams: DctP
Heteromeric, 338 amino acids: PaperBLAST, CDD, Compare to cluster