GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for gntT (gluconate:H+ symporter GntT) in D-gluconate catabolism

Or see other characterized proteins similar to gntT

Or see all steps for D-gluconate catabolism

Or cluster curated proteins matching a keyword

Definition of gntT

Fetched 7 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 7 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 438-465 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

b4265 L-idonate/5-ketogluconate/gluconate transporter from Escherichia coli K-12 substr. MG1655
IDNT_ECOLI / P39344 Gnt-II system L-idonate transporter; L-Ido transporter; 5-keto-D-gluconate transporter from Escherichia coli (strain K12)
TC 2.A.8.1.2 / P39344 L-Idonate/D-Gluconate:H+ symporter, IdnT, GntW, YjgT from Escherichia coli
PFams: GntP_permease, CitMHS, DctM
439 amino acids: PaperBLAST, CDD, Compare to cluster

b3415 high-affinity gluconate transporter from Escherichia coli K-12 substr. MG1655
P39835 high-affinity gluconate transporter from Escherichia coli (strain K12)
GNTT_ECOLI / P39835 High-affinity gluconate transporter; Gluconate permease; Gnt-I system from Escherichia coli (strain K12)
TC 2.A.8.1.4 / P39835 D-Gluconate:H+ symporter, GntT from Escherichia coli
PFams: GntP_permease, CitMHS, Na_H_antiporter
438 amino acids: PaperBLAST, CDD, Compare to cluster

b4321 fructuronate transporter from Escherichia coli K-12 substr. MG1655
P0AC94 fructuronate transporter from Escherichia coli (strain K12)
TC 2.A.8.1.3 / P0AC94 D-Fructuronate/D-gluconate:H+ symporter, GntP from Escherichia coli
PFams: GntP_permease, CitMHS
447 amino acids: PaperBLAST, CDD, Compare to cluster

b4476 low-affinity gluconate transporter from Escherichia coli K-12 substr. MG1655
P0AC96 low-affinity gluconate transporter from Escherichia coli (strain K12)
TC 2.A.8.1.8 / P0AC96 Low-affinity (212 from Escherichia coli (strain K12)
PFams: GntP_permease, CitMHS
446 amino acids: PaperBLAST, CDD, Compare to cluster

TC 2.A.8.1.1 / P12012 D-Gluconate:H+ symporter of 448 aas and 11 TMSs from Bacillus subtilis
PFams: GntP_permease, CitMHS
448 amino acids: PaperBLAST, CDD, Compare to cluster

BPHYT_RS16725 gluconate:H+ symporter (gntT) from Burkholderia phytofirmans PsJN
PFams: GntP_permease, CitMHS
465 amino acids: PaperBLAST, CDD, Compare to cluster

RR42_RS28835 gluconate:H+ symporter (gntT) from Cupriavidus basilensis 4G11
PFams: GntP_permease, CitMHS
453 amino acids: PaperBLAST, CDD, Compare to cluster