Clusters of Characterized Proteins

Clustering the characterized proteins for AO353_21715 (glucosaminate ABC transporter, permease component 1) in D-glucosamine (chitosamine) catabolism

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Definition of AO353_21715

• Curated sequence AO353_21715: ABC transporter for D-glucosamine, permease component 1
• Curated sequence Pf6N2E2_2052: ABC transporter for D-Glucosamine Hydrochloride, permease component 2
• Curated sequence AO356_00475: ABC transporter for D-Glucosamine, permease component 2
• Comment: Pseudomonas oxidize glucosamine to glucosaminate using glucose dehydrogenase (PMID:1849886), which is a periplasmic enzyme. So these 4-part "glucosamine" ABC transporters, which were identified by genetic data from various Pseudomonas, are probably glucosaminate transporters

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 220-220 amino acids (heteromeric)

AO353_21715 ABC transporter for D-glucosamine, permease component 1 from Pseudomonas fluorescens FW300-N2E3
PFams: BPD_transp_1
Heteromeric, 220 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_00475 ABC transporter for D-Glucosamine, permease component 2 from Pseudomonas fluorescens FW300-N2C3
PFams: BPD_transp_1
Heteromeric, 220 amino acids: PaperBLAST, CDD, Compare to cluster

Pf6N2E2_2052 ABC transporter for D-Glucosamine Hydrochloride, permease component 2 from Pseudomonas fluorescens FW300-N2E2
PFams: BPD_transp_1
Heteromeric, 220 amino acids: PaperBLAST, CDD, Compare to cluster