GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for AO353_21725 (glucosaminate ABC transporter, ATPase component) in D-glucosamine (chitosamine) catabolism

Or see other characterized proteins similar to AO353_21725

Or see all steps for D-glucosamine (chitosamine) catabolism

Or cluster curated proteins matching a keyword

Definition of AO353_21725

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 263-265 amino acids (heteromeric)

The first sequence in each cluster is the seed.

AO353_21725 ABC transporter for D-glucosamine, ATPase component from Pseudomonas fluorescens FW300-N2E3
PFams: ABC_tran
Heteromeric, 265 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_00465 ABC transporter for D-Glucosamine, putative ATPase component from Pseudomonas fluorescens FW300-N2C3
PFams: ABC_tran
Heteromeric, 263 amino acids: PaperBLAST, CDD, Compare to cluster

Pf6N2E2_2050 ABC transporter for D-Glucosamine, putative ATPase component from Pseudomonas fluorescens FW300-N2E2
PFams: ABC_tran
Heteromeric, 263 amino acids: PaperBLAST, CDD, Compare to cluster