GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for glc-kinase (glucosamine kinase) in D-glucosamine (chitosamine) catabolism

Or see other characterized proteins similar to glc-kinase

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Or cluster curated proteins matching a keyword

Definition of glc-kinase

Fetched 13 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 9 of these sequences

Found 3 clusters of similar sequences. Another 4 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 453-467 amino acids (not heteromeric)

Q6LXQ3 ADP-specific phosphofructokinase (EC 2.7.1.146); ADP-specific glucokinase (EC 2.7.1.147) from Methanococcus maripaludis
PFams: ADP_PFK_GK
463 amino acids: PaperBLAST, CDD, Compare to cluster

GLKA_THELN / Q7M537 ADP-dependent glucose/glucosamine kinase; ADP-dependent glucokinase; ADP-GK; ADPGK; Glucosamine kinase; GlcN kinase; EC 2.7.1.-; EC 2.7.1.147 from Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C)
Q7M537 ADP-specific glucokinase (EC 2.7.1.147) from Thermococcus litoralis
PFams: ADP_PFK_GK
467 amino acids: PaperBLAST, CDD, Compare to cluster

GLKA_PYRHO / O58328 ADP-dependent glucose/glucosamine kinase; ADP-dependent glucokinase; ADP-GK; ADPGK; Glucosamine kinase; GlcN kinase; EC 2.7.1.-; EC 2.7.1.147 from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
PFams: ADP_PFK_GK
457 amino acids: PaperBLAST, CDD, Compare to cluster

Q5JE39 ADP-dependent glucokinase (EC 2.7.1.147) from Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GLKA_THEKO / Q5JE39 ADP-dependent glucose/glucosamine kinase; ADP-dependent glucokinase; ADP-GK; ADPGK; Glucosamine kinase; GlcN kinase; EC 2.7.1.-; EC 2.7.1.147 from Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1))
PFams: ADP_PFK_GK
453 amino acids: PaperBLAST, CDD, Compare to cluster

Q9V2Z6 ADP-dependent glucokinase subunit (EC 2.7.1.147) from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GLKA_PYRFU / Q9V2Z6 ADP-dependent glucose/glucosamine kinase; ADP-dependent glucokinase; ADP-GK; ADPGK; Glucosamine kinase; GlcN kinase; EC 2.7.1.-; EC 2.7.1.147 from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
PFams: ADP_PFK_GK
455 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 399-438 amino acids (not heteromeric)

GLCNK_STRJI / A0A1H7TQR5 Glucosamine kinase; GlcN kinase; GlcNK; EC 2.7.1.8 from Streptacidiphilus jiangxiensis
438 amino acids: PaperBLAST, CDD, Compare to cluster

GLCNK_MYCS2 / I7FJX8 Glucosamine kinase; GlcN kinase; GlcNK; EC 2.7.1.8 from Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium smegmatis)
399 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 496-497 amino acids (not heteromeric)

Q9BRR6 ADP-specific glucokinase (EC 2.7.1.147) from Homo sapiens
PFams: ADP_PFK_GK
497 amino acids: PaperBLAST, CDD, Compare to cluster

ADPGK_MOUSE / Q8VDL4 ADP-dependent glucokinase; ADP-GK; ADPGK; EC 2.7.1.147 from Mus musculus (Mouse)
PFams: ADP_PFK_GK
496 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/4 heteromeric)

Q8R8N4 ADP-specific glucokinase (EC 2.7.1.147) from Caldanaerobacter subterraneus subsp. tengcongensis
PFams: ROK
312 amino acids: PaperBLAST, CDD

Q9KUA9 glucosamine kinase (EC 2.7.1.8) from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GSPK_VIBCH / Q9KUA9 Glucosamine kinase GspK; GlcN kinase; EC 2.7.1.8 from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
PFams: BcrAD_BadFG
294 amino acids: PaperBLAST, CDD

Q92VI2 Sugar amine kinase; EC=2.7.1.-
311 amino acids: PaperBLAST, CDD

b2388 glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli K-12 substr. MG1655
P0A6V8 glucokinase (EC 2.7.1.1; EC 2.7.1.8) from Escherichia coli (strain K12)
PFams: Glucokinase
321 amino acids: PaperBLAST, CDD