GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for glmS (L-glutamate mutase, S component) in L-glutamate catabolism

Or see other characterized proteins similar to glmS

Or see all steps for L-glutamate catabolism

Or cluster curated proteins matching a keyword

Definition of glmS

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 137-151 amino acids (heteromeric)

The first sequence in each cluster is the seed.

GMSS_CLOCO / P80078 Glutamate mutase sigma subunit; Glutamate mutase S chain; Glutamate mutase small subunit; Methylaspartate mutase; EC 5.4.99.1 from Clostridium cochlearium
P80078 methylaspartate mutase (EC 5.4.99.1) from Clostridium cochlearium
PFams: B12-binding
Heteromeric, 137 amino acids: PaperBLAST, CDD, Compare to cluster

GMSS_CLOTT / Q05488 Glutamate mutase sigma subunit; Glutamate mutase S chain; Glutamate mutase small subunit; Methylaspartate mutase; EC 5.4.99.1 from Clostridium tetanomorphum
Q05488 methylaspartate mutase (subunit 2/2) (EC 5.4.99.1) from Clostridium tetanomorphum
PFams: B12-binding
Heteromeric, 137 amino acids: PaperBLAST, CDD, Compare to cluster

Q5V467 glutamate mutase α subunit (EC 5.4.99.1) from Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
PFams: B12-binding
Heteromeric, 151 amino acids: PaperBLAST, CDD, Compare to cluster