Clusters of Characterized Proteins

Clustering the characterized proteins for aqp-3 (glycerol porter aqp-3) in glycerol catabolism

Or see other characterized proteins similar to aqp-3

Or see all steps for glycerol catabolism

Or cluster curated proteins matching a keyword

Definition of aqp-3

• Curated sequence E3UMZ6: Potato X intrinsic protein, XIP1
• Curated sequence 729057658: Aquaporin-3, Aqp-3 of 271 aas
• Curated sequence E3UMZ5: Morning glory XIP-1-1-α. Transports glycerol, urea and boric acid, but not water
• Curated sequence E3UN01: Tobacco X-intrinsic protein (XIP1-1-β). Transports glycerol, urea and boric acid, but not water

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 271-335 amino acids (not heteromeric)

TC 1.A.8.7.2 / E3UMZ6 Potato X intrinsic protein, XIP1 from Solanum tuberosum
PFams: MIP
325 amino acids: PaperBLAST, CDD, Compare to cluster

TC 1.A.8.8.17 / 729057658 Aquaporin-3, Aqp-3 of 271 aas from Opisthorchis viverrini
PFams: MIP
271 amino acids: PaperBLAST, CDD, Compare to cluster

TC 1.A.8.7.3 / E3UMZ5 Morning glory XIP-1-1-α. Transports glycerol, urea and boric acid, but not water from Ipomoea nil
PFams: MIP
335 amino acids: PaperBLAST, CDD, Compare to cluster

TC 1.A.8.7.1 / E3UN01 Tobacco X-intrinsic protein (XIP1-1-β). Transports glycerol, urea and boric acid, but not water from Nicotiana tomentosiformis
PFams: MIP
326 amino acids: PaperBLAST, CDD, Compare to cluster